Articles | Volume 19, issue 1
https://doi.org/10.5194/hess-19-241-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/hess-19-241-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
15 Jan 2015
Research article |
| 15 Jan 2015
Hydrometeorological effects of historical land-conversion in an ecosystem-atmosphere model of Northern South America
R. G. Knox
CORRESPONDING AUTHOR
now at: Lawrence Berkeley National Laboratory, Berkeley, California, USA
Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
Harvard University, Cambridge, Massachusetts, USA
A. L. S. Swann
University of Washington, Seattle, Washington, USA
K. Zhang
Harvard University, Cambridge, Massachusetts, USA
now at: Cooperative Institute for Mesoscale Meteorological Studies, University of Oklahoma, Oklahoma, USA
N. M. Levine
Harvard University, Cambridge, Massachusetts, USA
now at: University of Southern California, Los Angeles, California, USA
P. R. Moorcroft
Harvard University, Cambridge, Massachusetts, USA
R. L. Bras
Georgia Institute of Technology, Atlanta, Georgia, USA
Related authors
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
Short summary
Short summary
We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
Short summary
Short summary
We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Charles D. Koven, Ryan G. Knox, Rosie A. Fisher, Jeffrey Q. Chambers, Bradley O. Christoffersen, Stuart J. Davies, Matteo Detto, Michael C. Dietze, Boris Faybishenko, Jennifer Holm, Maoyi Huang, Marlies Kovenock, Lara M. Kueppers, Gregory Lemieux, Elias Massoud, Nathan G. McDowell, Helene C. Muller-Landau, Jessica F. Needham, Richard J. Norby, Thomas Powell, Alistair Rogers, Shawn P. Serbin, Jacquelyn K. Shuman, Abigail L. S. Swann, Charuleka Varadharajan, Anthony P. Walker, S. Joseph Wright, and Chonggang Xu
Biogeosciences, 17, 3017–3044, https://doi.org/10.5194/bg-17-3017-2020, https://doi.org/10.5194/bg-17-3017-2020, 2020
Short summary
Short summary
Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse ecosystems, yet most Earth system models do not take into account the diversity of plant traits in these forests and how this diversity may govern feedbacks. We present an approach to represent diverse competing plant types within Earth system models, test this approach at a tropical forest site, and explore how the representation of disturbance and competition governs traits of the forest community.
Marcos Longo, Ryan G. Knox, David M. Medvigy, Naomi M. Levine, Michael C. Dietze, Yeonjoo Kim, Abigail L. S. Swann, Ke Zhang, Christine R. Rollinson, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, https://doi.org/10.5194/gmd-12-4309-2019, 2019
Short summary
Short summary
Our paper describes the Ecosystem Demography model. This computer program calculates how plants and ground exchange heat, water, and carbon with the air, and how plants grow, reproduce and die in different climates. Most models simplify forests to an average big tree. We consider that tall, deep-rooted trees get more light and water than small plants, and that some plants can with shade and drought. This diversity helps us to better explain how plants live and interact with the atmosphere.
Marcos Longo, Ryan G. Knox, Naomi M. Levine, Abigail L. S. Swann, David M. Medvigy, Michael C. Dietze, Yeonjoo Kim, Ke Zhang, Damien Bonal, Benoit Burban, Plínio B. Camargo, Matthew N. Hayek, Scott R. Saleska, Rodrigo da Silva, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4347–4374, https://doi.org/10.5194/gmd-12-4347-2019, https://doi.org/10.5194/gmd-12-4347-2019, 2019
Short summary
Short summary
The Ecosystem Demography model calculates the fluxes of heat, water, and carbon between plants and ground and the air, and the life cycle of plants in different climates. To test if our calculations were reasonable, we compared our results with field and satellite measurements. Our model predicts well the extent of the Amazon forest, how much light forests absorb, and how much water forests release to the air. However, it must improve the tree growth rates and how fast dead plants decompose.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
Short summary
Short summary
We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
Short summary
Short summary
Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-15295-2013, https://doi.org/10.5194/hessd-10-15295-2013, 2013
Preprint withdrawn
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
Short summary
Short summary
We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Lingcheng Li, Yilin Fang, Zhonghua Zheng, Mingjie Shi, Marcos Longo, Charles D. Koven, Jennifer A. Holm, Rosie A. Fisher, Nate G. McDowell, Jeffrey Chambers, and L. Ruby Leung
Geosci. Model Dev., 16, 4017–4040, https://doi.org/10.5194/gmd-16-4017-2023, https://doi.org/10.5194/gmd-16-4017-2023, 2023
Short summary
Short summary
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Jiaying Zhang, Rafael L. Bras, Marcos Longo, and Tamara Heartsill Scalley
Geosci. Model Dev., 15, 5107–5126, https://doi.org/10.5194/gmd-15-5107-2022, https://doi.org/10.5194/gmd-15-5107-2022, 2022
Short summary
Short summary
We implemented hurricane disturbance in a vegetation dynamics model and calibrated the model with observations of a tropical forest. We used the model to study forest recovery from hurricane disturbance and found that a single hurricane disturbance enhances AGB and BA in the long term compared with a no-hurricane situation. The model developed and results presented in this study can be utilized to understand the impact of hurricane disturbances on forest recovery under the changing climate.
Elias C. Massoud, A. Anthony Bloom, Marcos Longo, John T. Reager, Paul A. Levine, and John R. Worden
Hydrol. Earth Syst. Sci., 26, 1407–1423, https://doi.org/10.5194/hess-26-1407-2022, https://doi.org/10.5194/hess-26-1407-2022, 2022
Short summary
Short summary
The water balance on river basin scales depends on a number of soil physical processes. Gaining information on these quantities using observations is a key step toward improving the skill of land surface hydrology models. In this study, we use data from the Gravity Recovery and Climate Experiment (NASA-GRACE) to inform and constrain these hydrologic processes. We show that our model is able to simulate the land hydrologic cycle for a watershed in the Amazon from January 2003 to December 2012.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
Short summary
Short summary
We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Charles D. Koven, Ryan G. Knox, Rosie A. Fisher, Jeffrey Q. Chambers, Bradley O. Christoffersen, Stuart J. Davies, Matteo Detto, Michael C. Dietze, Boris Faybishenko, Jennifer Holm, Maoyi Huang, Marlies Kovenock, Lara M. Kueppers, Gregory Lemieux, Elias Massoud, Nathan G. McDowell, Helene C. Muller-Landau, Jessica F. Needham, Richard J. Norby, Thomas Powell, Alistair Rogers, Shawn P. Serbin, Jacquelyn K. Shuman, Abigail L. S. Swann, Charuleka Varadharajan, Anthony P. Walker, S. Joseph Wright, and Chonggang Xu
Biogeosciences, 17, 3017–3044, https://doi.org/10.5194/bg-17-3017-2020, https://doi.org/10.5194/bg-17-3017-2020, 2020
Short summary
Short summary
Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse ecosystems, yet most Earth system models do not take into account the diversity of plant traits in these forests and how this diversity may govern feedbacks. We present an approach to represent diverse competing plant types within Earth system models, test this approach at a tropical forest site, and explore how the representation of disturbance and competition governs traits of the forest community.
Marcos Longo, Ryan G. Knox, David M. Medvigy, Naomi M. Levine, Michael C. Dietze, Yeonjoo Kim, Abigail L. S. Swann, Ke Zhang, Christine R. Rollinson, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, https://doi.org/10.5194/gmd-12-4309-2019, 2019
Short summary
Short summary
Our paper describes the Ecosystem Demography model. This computer program calculates how plants and ground exchange heat, water, and carbon with the air, and how plants grow, reproduce and die in different climates. Most models simplify forests to an average big tree. We consider that tall, deep-rooted trees get more light and water than small plants, and that some plants can with shade and drought. This diversity helps us to better explain how plants live and interact with the atmosphere.
Marcos Longo, Ryan G. Knox, Naomi M. Levine, Abigail L. S. Swann, David M. Medvigy, Michael C. Dietze, Yeonjoo Kim, Ke Zhang, Damien Bonal, Benoit Burban, Plínio B. Camargo, Matthew N. Hayek, Scott R. Saleska, Rodrigo da Silva, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4347–4374, https://doi.org/10.5194/gmd-12-4347-2019, https://doi.org/10.5194/gmd-12-4347-2019, 2019
Short summary
Short summary
The Ecosystem Demography model calculates the fluxes of heat, water, and carbon between plants and ground and the air, and the life cycle of plants in different climates. To test if our calculations were reasonable, we compared our results with field and satellite measurements. Our model predicts well the extent of the Amazon forest, how much light forests absorb, and how much water forests release to the air. However, it must improve the tree growth rates and how fast dead plants decompose.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
Short summary
Short summary
We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
Marcos A. S. Scaranello, Michael Keller, Marcos Longo, Maiza N. dos-Santos, Veronika Leitold, Douglas C. Morton, Ekena R. Pinagé, and Fernando Del Bon Espírito-Santo
Biogeosciences, 16, 3457–3474, https://doi.org/10.5194/bg-16-3457-2019, https://doi.org/10.5194/bg-16-3457-2019, 2019
Short summary
Short summary
The coarse dead wood component of the tropical forest carbon pool is rarely measured. For the first time, we developed models for predicting coarse dead wood in Amazonian forests by using airborne laser scanning data. Our models produced site-based estimates similar to independent field estimates found in the literature. Our study provides an approach for estimating coarse dead wood pools from remotely sensed data and mapping those pools over large scales in intact and degraded forests.
Istem Fer, Ryan Kelly, Paul R. Moorcroft, Andrew D. Richardson, Elizabeth M. Cowdery, and Michael C. Dietze
Biogeosciences, 15, 5801–5830, https://doi.org/10.5194/bg-15-5801-2018, https://doi.org/10.5194/bg-15-5801-2018, 2018
Short summary
Short summary
The computer models we use to understand and forecast the ecosystem changes have multiple components that determine their outcomes. Due to our limited observation capacities, these components bear uncertainties that in return affect our predictions. While there are techniques for reducing these uncertainties, they are not applicable to every model due to computational and statistical barriers. This research presents a method that lowers those barriers and allows us to improve model predictions.
Matthew N. Hayek, Marcos Longo, Jin Wu, Marielle N. Smith, Natalia Restrepo-Coupe, Raphael Tapajós, Rodrigo da Silva, David R. Fitzjarrald, Plinio B. Camargo, Lucy R. Hutyra, Luciana F. Alves, Bruce Daube, J. William Munger, Kenia T. Wiedemann, Scott R. Saleska, and Steven C. Wofsy
Biogeosciences, 15, 4833–4848, https://doi.org/10.5194/bg-15-4833-2018, https://doi.org/10.5194/bg-15-4833-2018, 2018
Short summary
Short summary
We investigated the roles that weather and forest disturbances like drought play in shaping changes in ecosystem photosynthesis and carbon exchange in an Amazon forest. We discovered that weather largely influenced differences between years, but a prior drought, which occurred 3 years before measurements started, likely hampered photosynthesis in the first year. This is the first atmospheric evidence that drought can have legacy impacts on Amazon forest photosynthesis.
Fabio F. Pereira, Fabio Farinosi, Mauricio E. Arias, Eunjee Lee, John Briscoe, and Paul R. Moorcroft
Hydrol. Earth Syst. Sci., 21, 4629–4648, https://doi.org/10.5194/hess-21-4629-2017, https://doi.org/10.5194/hess-21-4629-2017, 2017
Short summary
Short summary
ED2 is a terrestrial biosphere model (TBM) suited for investigating combined impacts of changes in climate, atmospheric CO2, and land cover on the water cycle. In this study, we describe the integration of ED2 with a hydrological routing scheme. The resulting ED2+R model calculates the lateral propagation of surface and subsurface runoff resulting from the TBM and determines spatiotemporal patterns of river flows. We successfully evaluated the ED2+R model in the Tapajós, Brazilian Amazon.
Saulo R. Freitas, Jairo Panetta, Karla M. Longo, Luiz F. Rodrigues, Demerval S. Moreira, Nilton E. Rosário, Pedro L. Silva Dias, Maria A. F. Silva Dias, Enio P. Souza, Edmilson D. Freitas, Marcos Longo, Ariane Frassoni, Alvaro L. Fazenda, Cláudio M. Santos e Silva, Cláudio A. B. Pavani, Denis Eiras, Daniela A. França, Daniel Massaru, Fernanda B. Silva, Fernando C. Santos, Gabriel Pereira, Gláuber Camponogara, Gonzalo A. Ferrada, Haroldo F. Campos Velho, Isilda Menezes, Julliana L. Freire, Marcelo F. Alonso, Madeleine S. Gácita, Maurício Zarzur, Rafael M. Fonseca, Rafael S. Lima, Ricardo A. Siqueira, Rodrigo Braz, Simone Tomita, Valter Oliveira, and Leila D. Martins
Geosci. Model Dev., 10, 189–222, https://doi.org/10.5194/gmd-10-189-2017, https://doi.org/10.5194/gmd-10-189-2017, 2017
Short summary
Short summary
We present a new version of the Brazilian developments on the Regional Atmospheric Modeling System (BRAMS) where different previous versions for weather, chemistry, and the carbon cycle were unified in a single harmonized software system. This version also has a new set of state-of-the-art physical parametrizations and higher computational parallel and memory usage efficiency. BRAMS has been applied for research and operational weather and air quality forecasting, largely in South America.
Douglas C. Morton, Jérémy Rubio, Bruce D. Cook, Jean-Philippe Gastellu-Etchegorry, Marcos Longo, Hyeungu Choi, Maria Hunter, and Michael Keller
Biogeosciences, 13, 2195–2206, https://doi.org/10.5194/bg-13-2195-2016, https://doi.org/10.5194/bg-13-2195-2016, 2016
Short summary
Short summary
Seasonal dynamics of tropical forest productivity remain an important source of uncertainty in assessments of the land carbon sink. This study confirms the potential for canopy structure and illumination geometry to alter the seasonal availability of light for canopy photosynthesis without changes in canopy composition. Our results point to the need for 3-D forest structure in ecosystem models to account the impact of changing illumination geometry on tropical forest productivity.
Y. Kim, P. R. Moorcroft, I. Aleinov, M. J. Puma, and N. Y. Kiang
Geosci. Model Dev., 8, 3837–3865, https://doi.org/10.5194/gmd-8-3837-2015, https://doi.org/10.5194/gmd-8-3837-2015, 2015
Short summary
Short summary
The Ent Terrestrial Biosphere Model is a mixed-canopy dynamic global vegetation model developed specifically for coupling with land surface hydrology and general circulation models. This study describes the leaf phenology submodel implemented in the Ent TBM. We evaluate the performance in reproducing observed leaf seasonal growth as well as water and carbon fluxes for four plant functional types at five Fluxnet sites.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
Short summary
Short summary
Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
L. Rowland, A. Harper, B. O. Christoffersen, D. R. Galbraith, H. M. A. Imbuzeiro, T. L. Powell, C. Doughty, N. M. Levine, Y. Malhi, S. R. Saleska, P. R. Moorcroft, P. Meir, and M. Williams
Geosci. Model Dev., 8, 1097–1110, https://doi.org/10.5194/gmd-8-1097-2015, https://doi.org/10.5194/gmd-8-1097-2015, 2015
Short summary
Short summary
This study evaluates the capability of five vegetation models to simulate the response of forest productivity to changes in temperature and drought, using data collected from an Amazonian forest. This study concludes that model consistencies in the responses of net canopy carbon production to temperature and precipitation change were the result of inconsistently modelled leaf-scale process responses and substantial variation in modelled leaf area responses.
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-15295-2013, https://doi.org/10.5194/hessd-10-15295-2013, 2013
Preprint withdrawn
C. Lepore, E. Arnone, L. V. Noto, G. Sivandran, and R. L. Bras
Hydrol. Earth Syst. Sci., 17, 3371–3387, https://doi.org/10.5194/hess-17-3371-2013, https://doi.org/10.5194/hess-17-3371-2013, 2013
Related subject area
Subject: Ecohydrology | Techniques and Approaches: Modelling approaches
Machine learning and global vegetation: random forests for downscaling and gap filling
Unraveling phenological and stomatal responses to flash drought and implications for water and carbon budgets
Bias-blind and bias-aware assimilation of leaf area index into the Noah-MP land surface model over Europe
Regional patterns and drivers of water flows along environmental, functional and stand structure gradients in Spanish forests
Technical note: Seamless extraction and analysis of river networks in R
Advancing stream classification and hydrologic modeling of ungaged basins for environmental flow management in coastal southern California
Improving regional climate simulations based on a hybrid data assimilation and machine learning method
A comprehensive assessment of in situ and remote sensing soil moisture data assimilation in the APSIM model for improving agricultural forecasting across the US Midwest
Does non-stationarity induced by multiyear drought invalidate the paired-catchment method?
Is the reputation of Eucalyptus plantations for using more water than Pinus plantations justified?
Attributing trend in naturalized streamflow to temporally explicit vegetation change and climate variation in the Yellow River basin of China
Impacts of different types of El Niño events on water quality over the Corn Belt, United States
Leveraging sap flow data in a catchment-scale hybrid model to improve soil moisture and transpiration estimates
Coupled modelling of hydrological processes and grassland production in two contrasting climates
Does maximization of net carbon profit enable the prediction of vegetation behaviour in savanna sites along a precipitation gradient?
Modelling the artificial forest (Robinia pseudoacacia L.) root–soil water interactions in the Loess Plateau, China
A deep learning hybrid predictive modeling (HPM) approach for estimating evapotranspiration and ecosystem respiration
Vegetation greening weakened the capacity of water supply to China's South-to-North Water Diversion Project
Structural changes to forests during regeneration affect water flux partitioning, water ages and hydrological connectivity: Insights from tracer-aided ecohydrological modelling
How does water yield respond to mountain pine beetle infestation in a semiarid forest?
Daily soil temperature modeling improved by integrating observed snow cover and estimated soil moisture in the USA Great Plains
Plant hydraulic transport controls transpiration sensitivity to soil water stress
Drought onset and propagation into soil moisture and grassland vegetation responses during the 2012–2019 major drought in Southern California
Quantifying the effects of urban green space on water partitioning and ages using an isotope-based ecohydrological model
Low and contrasting impacts of vegetation CO2 fertilization on global terrestrial runoff over 1982–2010: accounting for aboveground and belowground vegetation–CO2 effects
Global ecosystem-scale plant hydraulic traits retrieved using model–data fusion
Quantifying the effects of land use and model scale on water partitioning and water ages using tracer-aided ecohydrological models
Quantification of ecohydrological sensitivities and their influencing factors at the seasonal scale
Canopy temperature and heat stress are increased by compound high air temperature and water stress and reduced by irrigation – a modeling analysis
Evaluating a landscape-scale daily water balance model to support spatially continuous representation of flow intermittency throughout stream networks
Testing water fluxes and storage from two hydrology configurations within the ORCHIDEE land surface model across US semi-arid sites
Novel Keeling-plot-based methods to estimate the isotopic composition of ambient water vapor
Disentangling temporal and population variability in plant root water uptake from stable isotopic analysis: when rooting depth matters in labeling studies
Calibration of hydrological models for ecologically relevant streamflow predictions: a trade-off between fitting well to data and estimating consistent parameter sets?
Spatial variability of mean daily estimates of actual evaporation from remotely sensed imagery and surface reference data
Quantification of soil water balance components based on continuous soil moisture measurement and the Richards equation in an irrigated agricultural field of a desert oasis
Mapping the suitability of groundwater-dependent vegetation in a semi-arid Mediterranean area
Modeling boreal forest evapotranspiration and water balance at stand and catchment scales: a spatial approach
The 18O ecohydrology of a grassland ecosystem – predictions and observations
A comprehensive sensitivity and uncertainty analysis for discharge and nitrate-nitrogen loads involving multiple discrete model inputs under future changing conditions
Dynamic responses of DOC and DIC transport to different flow regimes in a subtropical small mountainous river
Evaluation of ORCHIDEE-MICT-simulated soil moisture over China and impacts of different atmospheric forcing data
Testing an optimality-based model of rooting zone water storage capacity in temperate forests
A regional-scale ecological risk framework for environmental flow evaluations
Climate-driven disturbances in the San Juan River sub-basin of the Colorado River
Dominant effect of increasing forest biomass on evapotranspiration: interpretations of movement in Budyko space
Modeling the potential impacts of climate change on the water table level of selected forested wetlands in the southeastern United States
Calibration of a parsimonious distributed ecohydrological daily model in a data-scarce basin by exclusively using the spatio-temporal variation of NDVI
Importance of considering riparian vegetation requirements for the long-term efficiency of environmental flows in aquatic microhabitats
Waning habitats due to climate change: the effects of changes in streamflow and temperature at the rear edge of the distribution of a cold-water fish
Barry van Jaarsveld, Sandra M. Hauswirth, and Niko Wanders
Hydrol. Earth Syst. Sci., 28, 2357–2374, https://doi.org/10.5194/hess-28-2357-2024, https://doi.org/10.5194/hess-28-2357-2024, 2024
Short summary
Short summary
Drought often manifests itself in vegetation; however, obtaining high-resolution remote-sensing products that are spatially and temporally consistent is difficult. In this study, we show that machine learning (ML) can fill data gaps in existing products. We also demonstrate that ML can be used as a downscaling tool. By relying on ML for gap filling and downscaling, we can obtain a more holistic view of the impacts of drought on vegetation.
Nicholas K. Corak, Jason A. Otkin, Trent W. Ford, and Lauren E. L. Lowman
Hydrol. Earth Syst. Sci., 28, 1827–1851, https://doi.org/10.5194/hess-28-1827-2024, https://doi.org/10.5194/hess-28-1827-2024, 2024
Short summary
Short summary
We simulate how dynamic vegetation interacts with the atmosphere during extreme drought events known as flash droughts. We find that plants nearly halt water and carbon exchanges and limit their growth during flash drought. This work has implications for how to account for changes in vegetation state during extreme drought events when making predictions under future climate scenarios.
Samuel Scherrer, Gabriëlle De Lannoy, Zdenko Heyvaert, Michel Bechtold, Clement Albergel, Tarek S. El-Madany, and Wouter Dorigo
Hydrol. Earth Syst. Sci., 27, 4087–4114, https://doi.org/10.5194/hess-27-4087-2023, https://doi.org/10.5194/hess-27-4087-2023, 2023
Short summary
Short summary
We explored different options for data assimilation (DA) of the remotely sensed leaf area index (LAI). We found strong biases between LAI predicted by Noah-MP and observations. LAI DA that does not take these biases into account can induce unphysical patterns in the resulting LAI and flux estimates and leads to large changes in the climatology of root zone soil moisture. We tested two bias-correction approaches and explored alternative solutions to treating bias in LAI DA.
Jesús Sánchez-Dávila, Miquel De Cáceres, Jordi Vayreda, and Javier Retana
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2023-255, https://doi.org/10.5194/hess-2023-255, 2023
Revised manuscript accepted for HESS
Short summary
Short summary
Forest blue water is determined by climate, functional traits and stand structure variables. LAI is the main driver in the trade-off between the blue and green water. Blue water is concentrated in the autumn-winter season and deciduous trees can increase the relative blue water. The leave phenology and seasonal distribution are determinants in the relative blue water.
Luca Carraro
Hydrol. Earth Syst. Sci., 27, 3733–3742, https://doi.org/10.5194/hess-27-3733-2023, https://doi.org/10.5194/hess-27-3733-2023, 2023
Short summary
Short summary
Mathematical models are key to the study of environmental processes in rivers. Such models often require information on river morphology from geographic information system (GIS) software, which hinders the use of replicable workflows. Here I present rivnet, an R package for simple, robust, GIS-free extraction and analysis of river networks. The package is designed so as to require minimal user input and is oriented towards ecohydrological, ecological and biogeochemical modeling.
Stephen K. Adams, Brian P. Bledsoe, and Eric D. Stein
Hydrol. Earth Syst. Sci., 27, 3021–3039, https://doi.org/10.5194/hess-27-3021-2023, https://doi.org/10.5194/hess-27-3021-2023, 2023
Short summary
Short summary
Managing streams for environmental flows involves prioritizing healthy stream ecosystems while distributing water resources. Classifying streams of similar types is a useful step in developing environmental flows. Environmental flows are often developed on data-poor streams that must be modeled. This paper has developed a new method of classification that prioritizes model accuracy. The new method advances environmental streamflow management and modeling of data-poor watersheds.
Xinlei He, Yanping Li, Shaomin Liu, Tongren Xu, Fei Chen, Zhenhua Li, Zhe Zhang, Rui Liu, Lisheng Song, Ziwei Xu, Zhixing Peng, and Chen Zheng
Hydrol. Earth Syst. Sci., 27, 1583–1606, https://doi.org/10.5194/hess-27-1583-2023, https://doi.org/10.5194/hess-27-1583-2023, 2023
Short summary
Short summary
This study highlights the role of integrating vegetation and multi-source soil moisture observations in regional climate models via a hybrid data assimilation and machine learning method. In particular, we show that this approach can improve land surface fluxes, near-surface atmospheric conditions, and land–atmosphere interactions by implementing detailed land characterization information in basins with complex underlying surfaces.
Marissa Kivi, Noemi Vergopolan, and Hamze Dokoohaki
Hydrol. Earth Syst. Sci., 27, 1173–1199, https://doi.org/10.5194/hess-27-1173-2023, https://doi.org/10.5194/hess-27-1173-2023, 2023
Short summary
Short summary
This study attempts to provide a framework for direct integration of soil moisture observations collected from soil sensors and satellite imagery into process-based crop models for improving the representation of agricultural systems. The performance of this framework was evaluated across 19 sites times years for crop yield, normalized difference vegetation index (NDVI), soil moisture, tile flow drainage, and nitrate leaching.
Yunfan Zhang, Lei Cheng, Lu Zhang, Shujing Qin, Liu Liu, Pan Liu, and Yanghe Liu
Hydrol. Earth Syst. Sci., 26, 6379–6397, https://doi.org/10.5194/hess-26-6379-2022, https://doi.org/10.5194/hess-26-6379-2022, 2022
Short summary
Short summary
Multiyear drought has been demonstrated to cause non-stationary rainfall–runoff relationship. But whether changes can invalidate the most fundamental method (i.e., paired-catchment method (PCM)) for separating vegetation change impacts is still unknown. Using paired-catchment data with 10-year drought, PCM is shown to still be reliable even in catchments with non-stationarity. A new framework is further proposed to separate impacts of two non-stationary drivers, using paired-catchment data.
Don A. White, Shiqi Ren, Daniel S. Mendham, Francisco Balocchi-Contreras, Richard P. Silberstein, Dean Meason, Andrés Iroumé, and Pablo Ramirez de Arellano
Hydrol. Earth Syst. Sci., 26, 5357–5371, https://doi.org/10.5194/hess-26-5357-2022, https://doi.org/10.5194/hess-26-5357-2022, 2022
Short summary
Short summary
Of all the planting options for wood production and carbon storage, Eucalyptus species provoke the greatest concern about their effect on water resources. We compared Eucalyptus and Pinus species (the two most widely planted genera) by fitting a simple model to the published estimates of their annual water use. There was no significant difference between the two genera. This has important implications for the global debate around Eucalyptus and is an option for carbon forests.
Zhihui Wang, Qiuhong Tang, Daoxi Wang, Peiqing Xiao, Runliang Xia, Pengcheng Sun, and Feng Feng
Hydrol. Earth Syst. Sci., 26, 5291–5314, https://doi.org/10.5194/hess-26-5291-2022, https://doi.org/10.5194/hess-26-5291-2022, 2022
Short summary
Short summary
Variable infiltration capacity simulation considering dynamic vegetation types and structural parameters is able to better capture the effect of temporally explicit vegetation change and climate variation in hydrological regimes. Vegetation greening including interannual LAI and intra-annual LAI temporal pattern change induced by large-scale ecological restoration and non-vegetation underlying surface change played dominant roles in the natural streamflow reduction of the Yellow River basin.
Pan Chen, Wenhong Li, and Keqi He
Hydrol. Earth Syst. Sci., 26, 4875–4892, https://doi.org/10.5194/hess-26-4875-2022, https://doi.org/10.5194/hess-26-4875-2022, 2022
Short summary
Short summary
The study assessed changes in total nitrogen (TN) and total phosphorus (TP) loads in response to eastern Pacific (EP) and central Pacific (CP) El Niño events over the Corn Belt, USA, using the SWAT model. Results showed that EP (CP) El Niño events improved (exacerbated) water quality in the region. Furthermore, EP El Niño had a much broader and longer impact on water quality at the outlets, but CP El Niño could lead to similar increases in TN/TP loads as EP El Niño at the specific watersheds.
Ralf Loritz, Maoya Bassiouni, Anke Hildebrandt, Sibylle K. Hassler, and Erwin Zehe
Hydrol. Earth Syst. Sci., 26, 4757–4771, https://doi.org/10.5194/hess-26-4757-2022, https://doi.org/10.5194/hess-26-4757-2022, 2022
Short summary
Short summary
In this study, we combine a deep-learning approach that predicts sap flow with a hydrological model to improve soil moisture and transpiration estimates at the catchment scale. Our results highlight that hybrid-model approaches, combining machine learning with physically based models, are a promising way to improve our ability to make hydrological predictions.
Nicholas Jarvis, Jannis Groh, Elisabet Lewan, Katharina H. E. Meurer, Walter Durka, Cornelia Baessler, Thomas Pütz, Elvin Rufullayev, and Harry Vereecken
Hydrol. Earth Syst. Sci., 26, 2277–2299, https://doi.org/10.5194/hess-26-2277-2022, https://doi.org/10.5194/hess-26-2277-2022, 2022
Short summary
Short summary
We apply an eco-hydrological model to data on soil water balance and grassland growth obtained at two sites with contrasting climates. Our results show that the grassland in the drier climate had adapted by developing deeper roots, which maintained water supply to the plants in the face of severe drought. Our study emphasizes the importance of considering such plastic responses of plant traits to environmental stress in the modelling of soil water balance and plant growth under climate change.
Remko C. Nijzink, Jason Beringer, Lindsay B. Hutley, and Stanislaus J. Schymanski
Hydrol. Earth Syst. Sci., 26, 525–550, https://doi.org/10.5194/hess-26-525-2022, https://doi.org/10.5194/hess-26-525-2022, 2022
Short summary
Short summary
Most models that simulate water and carbon exchanges with the atmosphere rely on information about vegetation, but optimality models predict vegetation properties based on general principles. Here, we use the Vegetation Optimality Model (VOM) to predict vegetation behaviour at five savanna sites. The VOM overpredicted vegetation cover and carbon uptake during the wet seasons but also performed similarly to conventional models, showing that vegetation optimality is a promising approach.
Hongyu Li, Yi Luo, Lin Sun, Xiangdong Li, Changkun Ma, Xiaolei Wang, Ting Jiang, and Haoyang Zhu
Hydrol. Earth Syst. Sci., 26, 17–34, https://doi.org/10.5194/hess-26-17-2022, https://doi.org/10.5194/hess-26-17-2022, 2022
Short summary
Short summary
Drying soil layers (DSLs) have been extensively reported in artificial forestland in the Loess Plateau, China, which has limited water resources and deep loess. To address this issue relating to plant root–soil water interactions, this study developed a root growth model that simulates both the dynamic rooting depth and fine-root distribution. Evaluation vs. field data proved a positive performance. Long-term simulation reproduced the evolution process of the DSLs and revealed their mechanisms.
Jiancong Chen, Baptiste Dafflon, Anh Phuong Tran, Nicola Falco, and Susan S. Hubbard
Hydrol. Earth Syst. Sci., 25, 6041–6066, https://doi.org/10.5194/hess-25-6041-2021, https://doi.org/10.5194/hess-25-6041-2021, 2021
Short summary
Short summary
The novel hybrid predictive modeling (HPM) approach uses a long short-term memory recurrent neural network to estimate evapotranspiration (ET) and ecosystem respiration (Reco) with only meteorological and remote-sensing inputs. We developed four use cases to demonstrate the applicability of HPM. The results indicate HPM is capable of providing ET and Reco estimations in challenging mountainous systems and enhances our understanding of watershed dynamics at sparsely monitored watersheds.
Jiehao Zhang, Yulong Zhang, Ge Sun, Conghe Song, Matthew P. Dannenberg, Jiangfeng Li, Ning Liu, Kerong Zhang, Quanfa Zhang, and Lu Hao
Hydrol. Earth Syst. Sci., 25, 5623–5640, https://doi.org/10.5194/hess-25-5623-2021, https://doi.org/10.5194/hess-25-5623-2021, 2021
Short summary
Short summary
To quantify how vegetation greening impacts the capacity of water supply, we built a hybrid model and conducted a case study using the upper Han River basin (UHRB) that serves as the water source area to the world’s largest water diversion project. Vegetation greening in the UHRB during 2001–2018 induced annual water yield (WY) greatly decreased. Vegetation greening also increased the possibility of drought and reduced a quarter of WY on average during drought periods.
Aaron J. Neill, Christian Birkel, Marco P. Maneta, Doerthe Tetzlaff, and Chris Soulsby
Hydrol. Earth Syst. Sci., 25, 4861–4886, https://doi.org/10.5194/hess-25-4861-2021, https://doi.org/10.5194/hess-25-4861-2021, 2021
Short summary
Short summary
Structural changes (cover and height of vegetation plus tree canopy characteristics) to forests during regeneration on degraded land affect how water is partitioned between streamflow, groundwater recharge and evapotranspiration. Partitioning most strongly deviates from baseline conditions during earlier stages of regeneration with dense forest, while recovery may be possible as the forest matures and opens out. This has consequences for informing sustainable landscape restoration strategies.
Jianning Ren, Jennifer C. Adam, Jeffrey A. Hicke, Erin J. Hanan, Christina L. Tague, Mingliang Liu, Crystal A. Kolden, and John T. Abatzoglou
Hydrol. Earth Syst. Sci., 25, 4681–4699, https://doi.org/10.5194/hess-25-4681-2021, https://doi.org/10.5194/hess-25-4681-2021, 2021
Short summary
Short summary
Mountain pine beetle outbreaks have caused widespread tree mortality. While some research shows that water yield increases after trees are killed, many others document no change or a decrease. The climatic and environmental mechanisms driving hydrologic response to tree mortality are not well understood. We demonstrated that the direction of hydrologic response is a function of multiple factors, so previous studies do not necessarily conflict with each other; they represent different conditions.
Haidong Zhao, Gretchen F. Sassenrath, Mary Beth Kirkham, Nenghan Wan, and Xiaomao Lin
Hydrol. Earth Syst. Sci., 25, 4357–4372, https://doi.org/10.5194/hess-25-4357-2021, https://doi.org/10.5194/hess-25-4357-2021, 2021
Short summary
Short summary
This study was done to develop an improved soil temperature model for the USA Great Plains by using common weather station variables as inputs. After incorporating knowledge of estimated soil moisture and observed daily snow depth, the improved model showed a near 50 % gain in performance compared to the original model. We conclude that our improved model can better estimate soil temperature at the surface soil layer where most hydrological and biological processes occur.
Brandon P. Sloan, Sally E. Thompson, and Xue Feng
Hydrol. Earth Syst. Sci., 25, 4259–4274, https://doi.org/10.5194/hess-25-4259-2021, https://doi.org/10.5194/hess-25-4259-2021, 2021
Short summary
Short summary
Plants affect the global water and carbon cycles by modifying their water use and carbon intake in response to soil moisture. Global climate models represent this response with either simple empirical models or complex physical models. We reveal that the latter improves predictions in plants with large flow resistance; however, adding dependence on atmospheric moisture demand to the former matches performance of the latter, leading to a new tool for improving carbon and water cycle predictions.
Maria Magdalena Warter, Michael Bliss Singer, Mark O. Cuthbert, Dar Roberts, Kelly K. Caylor, Romy Sabathier, and John Stella
Hydrol. Earth Syst. Sci., 25, 3713–3729, https://doi.org/10.5194/hess-25-3713-2021, https://doi.org/10.5194/hess-25-3713-2021, 2021
Short summary
Short summary
Intensified drying of soil and grassland vegetation is raising the impact of fire severity and extent in Southern California. While browned grassland is a common sight during the dry season, this study has shown that there is a pronounced shift in the timing of senescence, due to changing climate conditions favoring milder winter temperatures and increased precipitation variability. Vegetation may be limited in its ability to adapt to these shifts, as drought periods become more frequent.
Mikael Gillefalk, Dörthe Tetzlaff, Reinhard Hinkelmann, Lena-Marie Kuhlemann, Aaron Smith, Fred Meier, Marco P. Maneta, and Chris Soulsby
Hydrol. Earth Syst. Sci., 25, 3635–3652, https://doi.org/10.5194/hess-25-3635-2021, https://doi.org/10.5194/hess-25-3635-2021, 2021
Short summary
Short summary
We used a tracer-aided ecohydrological model to quantify water flux–storage–age interactions for three urban vegetation types: trees, shrub and grass. The model results showed that evapotranspiration increased in the order shrub < grass < trees during one growing season. Additionally, we could show how
infiltration hotspotscreated by runoff from sealed onto vegetated surfaces can enhance both evapotranspiration and groundwater recharge.
Yuting Yang, Tim R. McVicar, Dawen Yang, Yongqiang Zhang, Shilong Piao, Shushi Peng, and Hylke E. Beck
Hydrol. Earth Syst. Sci., 25, 3411–3427, https://doi.org/10.5194/hess-25-3411-2021, https://doi.org/10.5194/hess-25-3411-2021, 2021
Short summary
Short summary
This study developed an analytical ecohydrological model that considers three aspects of vegetation response to eCO2 (i.e., stomatal response, LAI response, and rooting depth response) to detect the impact of eCO2 on continental runoff over the past 3 decades globally. Our findings suggest a minor role of eCO2 on the global runoff changes, yet highlight the negative runoff–eCO2 response in semiarid and arid regions which may further threaten the limited water resource there.
Yanlan Liu, Nataniel M. Holtzman, and Alexandra G. Konings
Hydrol. Earth Syst. Sci., 25, 2399–2417, https://doi.org/10.5194/hess-25-2399-2021, https://doi.org/10.5194/hess-25-2399-2021, 2021
Short summary
Short summary
The flow of water through plants varies with species-specific traits. To determine how they vary across the world, we mapped the traits that best allowed a model to match microwave satellite data. We also defined average values across a few clusters of trait behavior. These form a tractable solution for use in large-scale models. Transpiration estimates using these clusters were more accurate than if using plant functional types. We expect our maps to improve transpiration forecasts.
Aaron Smith, Doerthe Tetzlaff, Lukas Kleine, Marco Maneta, and Chris Soulsby
Hydrol. Earth Syst. Sci., 25, 2239–2259, https://doi.org/10.5194/hess-25-2239-2021, https://doi.org/10.5194/hess-25-2239-2021, 2021
Short summary
Short summary
We used a tracer-aided ecohydrological model on a mixed land use catchment in northeastern Germany to quantify water flux–storage–age interactions at four model grid resolutions. The model's ability to reproduce spatio-temporal flux–storage–age interactions decreases with increasing model grid sizes. Similarly, larger model grids showed vegetation-influenced changes in blue and green water partitioning. Simulations reveal the value of measured soil and stream isotopes for model calibration.
Yiping Hou, Mingfang Zhang, Xiaohua Wei, Shirong Liu, Qiang Li, Tijiu Cai, Wenfei Liu, Runqi Zhao, and Xiangzhuo Liu
Hydrol. Earth Syst. Sci., 25, 1447–1466, https://doi.org/10.5194/hess-25-1447-2021, https://doi.org/10.5194/hess-25-1447-2021, 2021
Short summary
Short summary
Ecohydrological sensitivity, defined as the response intensity of streamflow to vegetation change, indicates the hydrological sensitivity to vegetation change. The study revealed seasonal ecohydrological sensitivities were highly variable, depending on climate condition and watershed attributes. Dry season ecohydrological sensitivity was mostly determined by topography, soil and vegetation, while wet season ecohydrological sensitivity was mainly controlled by soil, landscape and vegetation.
Xiangyu Luan and Giulia Vico
Hydrol. Earth Syst. Sci., 25, 1411–1423, https://doi.org/10.5194/hess-25-1411-2021, https://doi.org/10.5194/hess-25-1411-2021, 2021
Short summary
Short summary
Crop yield is reduced by heat and water stress, particularly when they co-occur. We quantify the joint effects of (unpredictable) air temperature and soil water availability on crop heat stress via a mechanistic model. Larger but more infrequent precipitation increased crop canopy temperatures. Keeping crops well watered via irrigation could reduce canopy temperature but not enough to always exclude heat damage. Thus, irrigation is only a partial solution to adapt to warmer and drier climates.
Songyan Yu, Hong Xuan Do, Albert I. J. M. van Dijk, Nick R. Bond, Peirong Lin, and Mark J. Kennard
Hydrol. Earth Syst. Sci., 24, 5279–5295, https://doi.org/10.5194/hess-24-5279-2020, https://doi.org/10.5194/hess-24-5279-2020, 2020
Short summary
Short summary
There is a growing interest globally in the spatial distribution and temporal dynamics of intermittently flowing streams and rivers. We developed an approach to quantify catchment-wide flow intermittency over long time frames. Modelled patterns of flow intermittency in eastern Australia revealed highly dynamic behaviour in space and time. The developed approach is transferable to other parts of the world and can inform hydro-ecological understanding and management of intermittent streams.
Natasha MacBean, Russell L. Scott, Joel A. Biederman, Catherine Ottlé, Nicolas Vuichard, Agnès Ducharne, Thomas Kolb, Sabina Dore, Marcy Litvak, and David J. P. Moore
Hydrol. Earth Syst. Sci., 24, 5203–5230, https://doi.org/10.5194/hess-24-5203-2020, https://doi.org/10.5194/hess-24-5203-2020, 2020
Yusen Yuan, Taisheng Du, Honglang Wang, and Lixin Wang
Hydrol. Earth Syst. Sci., 24, 4491–4501, https://doi.org/10.5194/hess-24-4491-2020, https://doi.org/10.5194/hess-24-4491-2020, 2020
Short summary
Short summary
The isotopic composition of ambient water vapor is an important source of atmospheric water vapor and has not been able to be estimated to date using the Keeling plot approach. Here we proposed two new methods to estimate the isotopic composition of ambient water vapor: one using the intersection point method and another relying on the intermediate value theorem.
Valentin Couvreur, Youri Rothfuss, Félicien Meunier, Thierry Bariac, Philippe Biron, Jean-Louis Durand, Patricia Richard, and Mathieu Javaux
Hydrol. Earth Syst. Sci., 24, 3057–3075, https://doi.org/10.5194/hess-24-3057-2020, https://doi.org/10.5194/hess-24-3057-2020, 2020
Short summary
Short summary
Isotopic labeling of soil water is a broadly used tool for tracing the origin of water extracted by plants and computing root water uptake (RWU) profiles with multisource mixing models. In this study, we show how a method such as this may misconstrue time series of xylem water isotopic composition as the temporal dynamics of RWU by simulating data collected during a tall fescue rhizotron experiment with an isotope-enabled physical soil–root model accounting for variability in root traits.
Thibault Hallouin, Michael Bruen, and Fiachra E. O'Loughlin
Hydrol. Earth Syst. Sci., 24, 1031–1054, https://doi.org/10.5194/hess-24-1031-2020, https://doi.org/10.5194/hess-24-1031-2020, 2020
Short summary
Short summary
A hydrological model was used to compare different parameterisation strategies in view of predicting ecologically relevant streamflow indices in 33 Irish catchments. Compared for 14 different periods, a strategy fitting simulated and observed streamflow indices yielded better performance than fitting simulated and observed streamflow, but it also yielded a less consistent ensemble of parameter sets, suggesting that these indices may not be hydrologically relevant for model parameterisation.
Robert N. Armstrong, John W. Pomeroy, and Lawrence W. Martz
Hydrol. Earth Syst. Sci., 23, 4891–4907, https://doi.org/10.5194/hess-23-4891-2019, https://doi.org/10.5194/hess-23-4891-2019, 2019
Short summary
Short summary
Digital and thermal images taken near midday were used to scale daily point observations of key factors driving actual-evaporation estimates across a complex Canadian Prairie landscape. Point estimates of actual evaporation agreed well with observed values via eddy covariance. Impacts of spatial variations on areal estimates were minor, and no covariance was found between model parameters driving the energy term. The methods can be applied further to improve land surface parameterisations.
Zhongkai Li, Hu Liu, Wenzhi Zhao, Qiyue Yang, Rong Yang, and Jintao Liu
Hydrol. Earth Syst. Sci., 23, 4685–4706, https://doi.org/10.5194/hess-23-4685-2019, https://doi.org/10.5194/hess-23-4685-2019, 2019
Short summary
Short summary
A database of soil moisture measurements from the middle Heihe River basin of China was used to test the potential of a soil moisture database in estimating the soil water balance components (SWBCs). We determined SWBCs using a method that combined the soil water balance method and the inverse Richards equation. This work confirmed that relatively reasonable estimations of the SWBCs in coarse-textured sandy soils can be derived using soil moisture measurements.
Inês Gomes Marques, João Nascimento, Rita M. Cardoso, Filipe Miguéns, Maria Teresa Condesso de Melo, Pedro M. M. Soares, Célia M. Gouveia, and Cathy Kurz Besson
Hydrol. Earth Syst. Sci., 23, 3525–3552, https://doi.org/10.5194/hess-23-3525-2019, https://doi.org/10.5194/hess-23-3525-2019, 2019
Short summary
Short summary
Mediterranean cork woodlands are very particular agroforestry systems present in a confined area of the Mediterranean Basin. They are of great importance due to their high socioeconomic value; however, a decrease in water availability has put this system in danger. In this paper we build a model that explains this system's tree-species distribution in southern Portugal from environmental variables. This could help predict their future distribution under changing climatic conditions.
Samuli Launiainen, Mingfu Guan, Aura Salmivaara, and Antti-Jussi Kieloaho
Hydrol. Earth Syst. Sci., 23, 3457–3480, https://doi.org/10.5194/hess-23-3457-2019, https://doi.org/10.5194/hess-23-3457-2019, 2019
Short summary
Short summary
Boreal forest evapotranspiration and water cycle is modeled at stand and catchment scale using physiological and physical principles, open GIS data and daily weather data. The approach can predict daily evapotranspiration well across Nordic coniferous-dominated stands and successfully reproduces daily streamflow and annual evapotranspiration across boreal headwater catchments in Finland. The model is modular and simple and designed for practical applications over large areas using open data.
Regina T. Hirl, Hans Schnyder, Ulrike Ostler, Rudi Schäufele, Inga Schleip, Sylvia H. Vetter, Karl Auerswald, Juan C. Baca Cabrera, Lisa Wingate, Margaret M. Barbour, and Jérôme Ogée
Hydrol. Earth Syst. Sci., 23, 2581–2600, https://doi.org/10.5194/hess-23-2581-2019, https://doi.org/10.5194/hess-23-2581-2019, 2019
Short summary
Short summary
We evaluated the system-scale understanding of the propagation of the oxygen isotope signal (δ18O) of rain through soil and xylem to leaf water in a temperate drought-prone grassland. Biweekly δ18O observations of the water pools made during seven growing seasons were accurately reproduced by the 18O-enabled process-based model MuSICA. While water uptake occurred from shallow soil depths throughout dry and wet periods, leaf water 18O enrichment responded to both soil and atmospheric moisture.
Christoph Schürz, Brigitta Hollosi, Christoph Matulla, Alexander Pressl, Thomas Ertl, Karsten Schulz, and Bano Mehdi
Hydrol. Earth Syst. Sci., 23, 1211–1244, https://doi.org/10.5194/hess-23-1211-2019, https://doi.org/10.5194/hess-23-1211-2019, 2019
Short summary
Short summary
For two Austrian catchments we simulated discharge and nitrate-nitrogen (NO3-N) considering future changes of climate, land use, and point source emissions together with the impact of different setups and parametrizations of the implemented eco-hydrological model. In a comprehensive analysis we identified the dominant sources of uncertainty for the simulation of discharge and NO3-N and further examined how specific properties of the model inputs control the future simulation results.
Yu-Ting Shih, Pei-Hao Chen, Li-Chin Lee, Chien-Sen Liao, Shih-Hao Jien, Fuh-Kwo Shiah, Tsung-Yu Lee, Thomas Hein, Franz Zehetner, Chung-Te Chang, and Jr-Chuan Huang
Hydrol. Earth Syst. Sci., 22, 6579–6590, https://doi.org/10.5194/hess-22-6579-2018, https://doi.org/10.5194/hess-22-6579-2018, 2018
Short summary
Short summary
DOC and DIC export in Taiwan shows that the annual DOC and DIC fluxes were 2.7–4.8 and 48.4–54.3 ton C km2 yr1, respectively, which were approximately 2 and 20 times higher than the global means of 1.4 and 2.6 ton C km2 yr1, respectively.
Zun Yin, Catherine Ottlé, Philippe Ciais, Matthieu Guimberteau, Xuhui Wang, Dan Zhu, Fabienne Maignan, Shushi Peng, Shilong Piao, Jan Polcher, Feng Zhou, Hyungjun Kim, and other China-Trend-Stream project members
Hydrol. Earth Syst. Sci., 22, 5463–5484, https://doi.org/10.5194/hess-22-5463-2018, https://doi.org/10.5194/hess-22-5463-2018, 2018
Short summary
Short summary
Simulations in China were performed in ORCHIDEE driven by different forcing datasets: GSWP3, PGF, CRU-NCEP, and WFDEI. Simulated soil moisture was compared to several datasets to evaluate the ability of ORCHIDEE in reproducing soil moisture dynamics. Results showed that ORCHIDEE soil moisture coincided well with other datasets in wet areas and in non-irrigated areas. It suggested that the ORCHIDEE-MICT was suitable for further hydrological studies in China.
Matthias J. R. Speich, Heike Lischke, and Massimiliano Zappa
Hydrol. Earth Syst. Sci., 22, 4097–4124, https://doi.org/10.5194/hess-22-4097-2018, https://doi.org/10.5194/hess-22-4097-2018, 2018
Short summary
Short summary
To simulate the water balance of, e.g., a forest plot, it is important to estimate the maximum volume of water available to plants. This depends on soil properties and the average depth of roots. Rooting depth has proven challenging to estimate. Here, we applied a model assuming that plants dimension their roots to optimize their carbon budget. We compared its results with values obtained by calibrating a dynamic water balance model. In most cases, there is good agreement between both methods.
Gordon C. O'Brien, Chris Dickens, Eleanor Hines, Victor Wepener, Retha Stassen, Leo Quayle, Kelly Fouchy, James MacKenzie, P. Mark Graham, and Wayne G. Landis
Hydrol. Earth Syst. Sci., 22, 957–975, https://doi.org/10.5194/hess-22-957-2018, https://doi.org/10.5194/hess-22-957-2018, 2018
Short summary
Short summary
In global water resource allocation, robust tools are required to establish environmental flows. In addition, tools should characterize past, present and future consequences of altered flows and non-flow variables to social and ecological management objectives. PROBFLO is a risk assessment method designed to meet best practice principles for regional-scale holistic E-flow assessments. The approach has been developed in Africa and applied across the continent.
Katrina E. Bennett, Theodore J. Bohn, Kurt Solander, Nathan G. McDowell, Chonggang Xu, Enrique Vivoni, and Richard S. Middleton
Hydrol. Earth Syst. Sci., 22, 709–725, https://doi.org/10.5194/hess-22-709-2018, https://doi.org/10.5194/hess-22-709-2018, 2018
Short summary
Short summary
We applied the Variable Infiltration Capacity hydrologic model to examine scenarios of change under climate and landscape disturbances in the San Juan River basin, a major sub-watershed of the Colorado River basin. Climate change coupled with landscape disturbance leads to reduced streamflow in the San Juan River basin. Disturbances are expected to be widespread in this region. Therefore, accounting for these changes within the context of climate change is imperative for water resource planning.
Fernando Jaramillo, Neil Cory, Berit Arheimer, Hjalmar Laudon, Ype van der Velde, Thomas B. Hasper, Claudia Teutschbein, and Johan Uddling
Hydrol. Earth Syst. Sci., 22, 567–580, https://doi.org/10.5194/hess-22-567-2018, https://doi.org/10.5194/hess-22-567-2018, 2018
Short summary
Short summary
Which is the dominant effect on evapotranspiration in northern forests, an increase by recent forests expansion or a decrease by the water use response due to increasing CO2 concentrations? We determined the dominant effect during the period 1961–2012 in 65 Swedish basins. We used the Budyko framework to study the hydroclimatic movements in Budyko space. Our findings suggest that forest expansion is the dominant driver of long-term and large-scale evapotranspiration changes.
Jie Zhu, Ge Sun, Wenhong Li, Yu Zhang, Guofang Miao, Asko Noormets, Steve G. McNulty, John S. King, Mukesh Kumar, and Xuan Wang
Hydrol. Earth Syst. Sci., 21, 6289–6305, https://doi.org/10.5194/hess-21-6289-2017, https://doi.org/10.5194/hess-21-6289-2017, 2017
Short summary
Short summary
Forested wetlands provide myriad ecosystem services threatened by climate change. This study develops empirical hydrologic models by synthesizing hydrometeorological data across the southeastern US. We used global climate projections to model hydrological changes for five wetlands. We found all wetlands are predicted to become drier by the end of this century. This study suggests that climate change may substantially affect wetland biogeochemical cycles and other functions in the future.
Guiomar Ruiz-Pérez, Julian Koch, Salvatore Manfreda, Kelly Caylor, and Félix Francés
Hydrol. Earth Syst. Sci., 21, 6235–6251, https://doi.org/10.5194/hess-21-6235-2017, https://doi.org/10.5194/hess-21-6235-2017, 2017
Short summary
Short summary
Plants are shaping the landscape and controlling the hydrological cycle, particularly in arid and semi-arid ecosystems. Remote sensing data appears as an appealing source of information for vegetation monitoring, in particular in areas with a limited amount of available field data. Here, we present an example of how remote sensing data can be exploited in a data-scarce basin. We propose a mathematical methodology that can be used as a springboard for future applications.
Rui Rivaes, Isabel Boavida, José M. Santos, António N. Pinheiro, and Teresa Ferreira
Hydrol. Earth Syst. Sci., 21, 5763–5780, https://doi.org/10.5194/hess-21-5763-2017, https://doi.org/10.5194/hess-21-5763-2017, 2017
Short summary
Short summary
We analyzed the influence of considering riparian requirements for the long-term efficiency of environmental flows. After a decade, environmental flows disregarding riparian requirements promoted riparian degradation and consequently the change in the hydraulic characteristics of the river channel and the modification of the available habitat area for fish species. Environmental flows regarding riparian vegetation requirements were able to sustain the fish habitat close to the natural condition.
José María Santiago, Rafael Muñoz-Mas, Joaquín Solana-Gutiérrez, Diego García de Jalón, Carlos Alonso, Francisco Martínez-Capel, Javier Pórtoles, Robert Monjo, and Jaime Ribalaygua
Hydrol. Earth Syst. Sci., 21, 4073–4101, https://doi.org/10.5194/hess-21-4073-2017, https://doi.org/10.5194/hess-21-4073-2017, 2017
Short summary
Short summary
High-time-resolution models for streamflow and stream temperature are used in this study to predict future brown trout habitat loss. Flow reductions falling down to 51 % of current values and water temperature increases growing up to 4 ºC are predicted. Streamflow and temperature will act synergistically affecting fish. We found that the thermal response of rivers is influenced by basin geology and, consequently, geology will be also an influent factor in the cold-water fish distribution shift.
Cited articles
Albani, M., Medvigy, D., Hurtt, G. C., and Moorcroft, P. R.: The contributions of land-use change, CO2 fertilization, and climate variability to the Eastern US carbon sink, Global Change Biol., 12, 2370–2390, 2006.
Anthes, R. A.: Enhancement of convective precipitation by mesoscale variations in vegetative covering in semiarid regions, J. Clim. Appl. Meteorol., 23, 541–554, 1984.
Asdak, C., Jarvis, P. G., van Gardingen, P., and Fraser, A.: Rainfall interception loss in unlogged and logged forest areas of Central Kalimantan, Indonesia, J. Hydrol., 206, 237–244, 1998.
Avissar, R. and Werth, D.: Global hydroclimatological teleconnections resulting from tropical deforestation, J. Hydrometeorol., 6, 134–146, 2005.
Bagley, J., Desai, A., Harding, K., Synder, P., and Foley, J.: Drought and deforestation: Has land cover change influenced recent precipitation extremes in the Amazon?, J. Climate, 27, 345–361, 2014.
Baker, T., Phillips, O., Malhi, Y., Almeida, S., Arroyo, L., Fiore, A. D., Erwin, T., amd T.J. Killeen, N. H., Laurance, S., Laurance, W., Lewis, S., Monteagudo, A., Neill, D., Vargas, P., Pitman, N., Silva, N., and Vasquez-Martinez, R.: Increasing biomass in Amazonian forest plots, Philos. T. Roy. Soc. Lond. B, 359, 353–365, 2004a.
Baker, T., Phillips, O., Malhi, Y., Almeida, S., Arroyo, L., Fiore, A. D., Erwin, T., Killeen, S., Laurance, S., Laurance, W., Lewis, S., Lloyd, J., Monteagudo, A., Neill, D., Patino, S., Pitman, N., Silva, N., and Martinez, R. V.: Variation in wood density determines spatial patterns in Amazonian forest biomass, Global Change Biol., 10, 545–562, 2004b.
Baldi, M., Dalu, G. A., and Pielke, R. A.: Vertical velocities and available potential energy generated by landscape variability – theory, J. Appl. Meteorol. Clim., 47, 397–410, 2008.
Beljaars, A. C. M. and Holtslag, A. A. M.: Flux Parameterization over Land Surfaces for Atmospheric Models, J. Appl. Meteorol., 30, 327–341, 1991.
Benegas, L., Ilstedt, U., Roupsard, O., Jones, J., and Malmer, A.: Effects of trees on infiltrability and preferential flow in two contrasting agroecosystems in Central America, Agr. Ecosyst. Environ., 183, 185–196, 2014.
Cardille, J. and Foley, J.: Agricultural Land-use Change in Brazilian Amazonia Between 1980 and 1995: Evidence from Integrated Satellite and Census Data, Remote Sens. Environ., 87, 551–562, 2003.
Chapin, F., Matson, P., and Mooney, H.: Principles of Terrestrial Ecosystem Ecology, Springer-Verlag, New York, 2002.
Chappell, N., Bidin, K., and Tych, W.: Modelling rainfall and canopy controls on net-precipitation beneath selectively-logged tropical forest, Plant Ecology, 153, 215–229, 2001.
Chave, J., Riera, B., and Dubois, M.: Estimation of biomass in a neotropical forest of French Guiana: spatial and temporal variability, J. Trop. Ecol., 17, 79–96, 2001.
Chave, J., Muller-Landau, H. C., Baker, T. R., Easdale, T. A., Ter Steege, H., and Webb, C. O.: Regional and phylogenetic variation of wood density across 2456 neotropical tree species, Ecol. Appl., 16, 2356–2367, 2006.
Chen, C. and Cotton, W.: A One-Dimensional Simulations of the Stratocumulus-Capped Mixed Layer, Bound.-Lay. Meteorol., 25, 289–321, 1983.
Collatz, G. J., Ball, J., Grivet, C., and Berry, J. A.: Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes a laminar boundary layer, Agr. Forest Meteorol., 54, 107–136, 1991.
Collatz, G. J., Ribas-Carbo, M., and Berry, J.: Coupled Photosynthesis-Stomatal Conductance Model for Leaves of C4 Plants, Aust. J. Plant Physiol., 19, 519–538, 1992.
Cotton, W., Pielke, R., Walko, R., Liston, G., Tremback, C., Jiang, H., McAnelly, R., Harrington, J., Nicholls, M., Carrio, G., and McFadden, J.: RAMS 2001: Current status and future directions, Meteorol. Atmos. Phys., 82, 5–29, 2003.
Crockford, R. and Richardson, D.: Partitioning of rainfall into throughfall, stemflow and interception: effect of forest type, ground cover and climate, Hydrol. Process., 14, 2903–2920, 2000.
d'Almeida, C., Vörösmarty, C. J., Hurtt, G. C., Marengo, J. A., Dingman, S. L., and Keim, B. D.: The effects of deforestation on the hydrological cycle in Amazonia: a review on scale and resolution, Int. J. Climatol., 27, 633–647, 2007.
Dalu, G. A., Pielke, R. A., Baldi, M., and Zeng, X.: Heat and momentum fluxes induced by thermal inhomogeneities, J. Atmos. Sci., 53, 3286–3302, 1996.
Dee, D. P., Uppala, S. M., Simmons, A. J., Berrisford, P., Poli, P., Kobayashi, S., Andrae, U., Balmaseda, M. A., Balsamo, G., Bauer, P., Bechtold, P., Beljaars, A. C. M., van de Berg, L., Bidlot, J., Bormann, N., Delsol, C., Dragani, R., Fuentes, M., Geer, A. J., Haimberger, L., Healy, S. B., Hersbach, H., Hólm, E. V., Isaksen, L., Kållberg, P., Köhler, M., Matricardi, M., McNally, A. P., Monge-Sanz, B. M., Morcrette, J.-J., Park, B.-K., Peubey, C., de Rosnay, P., Tavolato, C., Thépaut, J.-N., and Vitart, F.: The ERA-Interim reanlysis: configuration and performance of the data assimilation system, Q. J. Roy. Meteorol. Soc., 137, 553–597, 2011.
Dickinson, R. and Henderson-Sellers, A.: Modeling Tropical Deforestation: A Study of GCM Land-Surface Parameterization, Q. J. Roy. Meteorol. Soc., 114, 439–462, 1988.
Dietz, J., Hoelscher, D., Leuschner, C., and Hendrayanto: Rainfall partitioning in relation to forest structure in differently managed montane forest stands in Central Sulawesi, Indonesia, Forest Ecol. Manage., 237, 170–178, 2006.
Dietze, M., Wolosin, M., and Clark, J.: Capturing diversity and inerspecific variability in allometries: A hierarchical approach, Forest Ecol. Manage., 256, 1939–1948, 2008.
Eltahir, E.: Role of Vegetation in Sustaining Large-Scale Atmospheric Circulations in the Tropics, J. Geophys. Res.-Atmos., 101, 4255–4268, 1996.
Eltahir, E. and Bras, R.: On the Response of the Tropical Atmosphere to Large-Scale Deforestation, Q. J. Roy. Meteorol. Soc., 119, 779–793, 1993.
Eltahir, E. A. B. and Bras, R.: Precipitation recyling in the Amazon basin, Q. J. Roy. Meteorol. Soc., 120, 861–880, 1994.
Fisch, G., Tota, J., Machado, L., Dias, M., Lyra, R., Nobre, C., Dolman, A., and Gash, J.: The convective boundary layer over pasture and forest in Amazonia, Theor. Appl. Climatol., 78, 47–59, 2004.
Freitas, S. R., Rodrigues, L. F., Longo, K. M., and Panetta, J.: Impact of a monotonic advection scheme with low numerical diffusion on transport modeling of emissions from biomass burning, J. Adv. Model. Earth Syst., 4, Q1, https://doi.org/10.1029/2011MS000084, 2012.
Gedney, N. and Valdes, P.: The effect of Amazonian deforestation on the northern hemisphere circulation and climate, Geophys. Res. Lett., 27, 3053–3056, 2000.
Geist, H. and Lambin, E.: Proximate Causes of Underlying Driving Forces of Tropical Deforestation, Bioscience, 52, 143–150, 2002.
Grell, G. A. and Dévényi, D.: A generalized approach to parameterizing convection combining ensemble and data assimilation techniques, Geophys. Res. Lett., 29, 38-1–38-4, 2002.
Harrington, J. and Olsson, P.: A Method for the Parameterization of Cloud Optical Properties in Bulk and Bin Microphysical Models. Implications for Arctic Cloud Boundary Layers, Atmos. Res., 57, 51–80, 2001.
Henderson-Sellers, A., Dickinson, R., Durbridge, T., Kennedy, P., McGufie, K., and Pitman, A.: Tropical Deforestation: Modeling Local to Regional Scale Climate Change, J. Geophys. Res., 98, 7289–7315, 1993.
Hurtt, G., Frolking, S., Fearon III, M. B. M., Shevialokova, E., Malyshew, S., Pacala, S., and Houghton, R.: The underpinnings of land-use history: three centuries of global gridded land-use transitions, wood harvest activity and resulting secondary lands, Global Change Biol., 12, 1–22, 2006.
INPE: Monitoring of the Amazon forest by satellite 2001–2002, Instituto Nacional de Pesquisas Espaciais, Technical Paper, Sao Jose Dos Campos, Brazil, 2003.
Jung, M., Reichstein, M., and Bondeau, A.: Towards global empirical upscaling of FLUXNET eddy covariance observations: validation of a model tree ensemble approach using a biosphere model, Biogeosciences, 6, 2001–2013, https://doi.org/10.5194/bg-6-2001-2009, 2009.
Jung, M., Reighstein, M., Margolis, H., Cescatti, A., Richardson, A., Arain, M. A., Arneth, A., Bernhofer, C., Bonal, D., Chen, J., Gianelle, D., Gobron, N., Kiely, G., Kutsch, W., Lasslop, G., Law, B., Lindroth, A., Merbold, L., Montagnani, L., Moors, E. J., Papale, D., Sottoconrola, M., Vaccari, F., and Williams, C.: Global Patterns of Land-Atmosphere Fluxes of Carbon Dioxide, Latent Heat, and Sensible Heat Derived from Eddy Covariance, Satellite and Meteorological Observations, J. Geophys. Res., 116, 1–16, 2011.
Kain, J.: The Kain-Fritsch Convective Parameterization: An Update, J. Appl. Meteorol., 43, 170–181, 2004.
Kain, J. and Fritsch, J.: A One-Dimensional Entraining-Detraining Plume Model and Its Application in Convective Parameterization, J. Atmos. Sci., 47, 2784–2802, 1990.
Kennard, D. and Gholz, H.: Effects of high- and low-intensity fires on soil properties and plant growth in a Bolivian dry forest, Plant Soil, 234, 119–129, 2001.
Kleidon, A. and Heimann, M.: Assessing the Role of Deep Rooted Vegetation in the Climate System with Model Simulations: Mechanism, Comparison to Observations and Implications for Amazonian Deforestation, Clim. Dynam., 16, 183–199, 2000.
Knox, R.: Land Conversion in Amazonia and Northern South America; Influences on Regional Hydrology and Ecosystem Response, PhD thesis, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA, 2012.
Knox, R., Bisht, G., Wang, J., and Bras, R.: Precipitation Variability over the Forest-to-Nonforest Transition in Southwestern Amazonia, J. Climate, 24, 2368–2377, 2011.
Lal, R.: Deforestation and land-use effects on soil degradation and rehabilitation in western Nigeria, 1. Soil physical and hydrological properties, Land Degred. Develop., 7, 19–45, 1996.
Lammering, B. and Dwyer, I.: Improvement of Water Balance in Land Surface Schemes by Random Cascade Disaggregation of Rainfall, Int. J. Climatol., 20, 681–695, 2000.
Laurance, W., Cochrane, M., Bergen, S., Fearnside, P., Delamonica, P., Barber, C., D'Angelo, S., and Fernandes, T.: The future of the Brazilian Amazon, Science, 291, 438–439, https://doi.org/10.1126/science.291.5503.438 2001.
Laurance, W., Nascimento, H., Laurance, S., Condit, R., D'Angelo, S., and Andrade, A.: Inferred longevity of Amazonian rainforest trees based on a long-term demographic study, Forest Ecol. Manage., 190, 131–143, 2004.
Lean, J. and Warrilow, D.: Simulation of the Regional Climatic Impact of Amazon Deforestation, Nature, 342, 411–413, 1989.
Lee, T. and Pielke, R.: Estimating the Soil Surface Specific-Humidity, J. Appl. Meteorol., 31, 480–484, 1992.
Leuning, R.: A critical appraisal of a combined stomatal-photosynthesis model for C3 plants, Plant Cell Environ., 18, 339–355, 1995.
Lewis, S.: Tropical forests and the changing earth system, Philos. T. Roy. Soc. B, 361, 195–210, 2006.
Martinez, L. and Zinck, J.: Temporal variation of soil compaction and deterioration of soil quality in pasture areas of Colombian Amazonia, Soil Till. Res., 75, 3–17, 2004.
Massman, W.: An Analytical One-Dimensional Model of Momentum Transfer by Vegetation of Arbitrary Structure, Bound.-Lay. Meteorol., 83, 407–421, 1997.
Medvigy, D., Wofsy, S., Munger, J., Hollinger, D., and Moorcroft, P.: Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2, J. Geophys. Res., 114, 1–21, 2009.
Medvigy, D., Walko, R., Otte, M., and Avissar, R.: The Ocean-Land-Atmosphere-Model: Optimization and Evaluation of Simulated Radiative Fluxes and Precipitation, Mon. Weather Rev., 138, 1923–1939, 2010.
Medvigy, D., Walko, R., and Avissar, R.: Effects of Deforestation on Spatiotemporal Distributions of Precipitation in South America, J. Climate, 24, 2147–2163, 2011.
Moorcroft, P., Hurtt, G., and Pacala, S.: A Method for Scaling Vegetation Dynamics: The Ecosystem Demography Model, Ecol. Monogr., 71, 557–586, 2001.
Muñoz-Villers, L. E. and McDonnell, J. J.: Land use change effects on runoff generation in a humid tropical montane cloud forest region, Hydrol. Earth Syst. Sci., 17, 3543–3560, https://doi.org/10.5194/hess-17-3543-2013, 2013.
Nakanishi, M. and Niino, H.: An improved Mellor-Yamada level-3 model with condensation physics: its numerical stability and application to a regional prediction of advection fog, Bound.-Lay. Meteorol., 119, 397–407, 2006.
Nepstad, D., de Carvalho, C., Davidson, E., Jipp, P., Lefebvre, P., Negreiros, H., dal Silva, E., Stone, T., Trubore, S., and Vieira, S.: The Role of Deep Roots in the Hydrological and Carbon Cycles of Amazonian Forests and Pastures, Nature, 372, 666–669, 1994.
Nepstad, D., Carvalho, G., Barros, A., Alencar, A., Capobianco, J., amd P. Moutinho, J. B., Lefebvre, P., Silva, U. L., and Prins, E.: Road paving, Fire Regime Feedbacks and the Future of Amazon Forests, Forest Ecol. Manage., 154, 395–407, 2001.
Nobre, C., Sellers, P., and Shukla, J.: Amazonian Deforestation and Regional Climate Change, J. Climate, 4, 957–988, 1991.
Pielke, R.: Influence of the spatial distribution of vegetation and soils on the prediction of cumulus convective rainfall, Rev. Geophys., 39, 151–171, 2001.
Pitman, A., Henderson-Sellers, A., and Yang, Z.: Sensitivity of Regional Climates to Localized Precipitation in Global-Models, Nature, 346, 734–737, 1990.
Poorter, L., Bongers, L., and Bongers, F.: Architecture of 54 moist-forest tree species: traits, trade-offs and functional groups, Ecology, 87, 1289–1301, 2006.
Quesada, C. A., Lloyd, J., Anderson, L. O., Fyllas, N. M., Schwarz, M., and Czimczik, C. I.: Soils of Amazonia with particular reference to the RAINFOR sites, Biogeosciences, 8, 1415–1440, https://doi.org/10.5194/bg-8-1415-2011, 2011.
Raupach, M., Finnigan, J., and Brunet, Y.: Coherent eddies and turbulence in vegetation canopies: The mixing-layer analogy, Bound.-Lay. Meteorol., 78, 351–382, 1996.
Rossato, L.: Estimativa da capacidade de armazenamento de água no solo do Brasil, Msc. thesis, Instituto Nacional de Pesquisas Espaciais (INPE), São José dos Campos, Brazil, 2001.
Scholes, R., Skole, D., and (eds.), J. I.: A Global Database of Soil Properties: Proposal for Implementation, Report of the Global Soils Task Group, Tech. Rep. IGBP-DIS Working Paper 10a, International Geosphere-Biosphere Programme – Data and Information System (IGBP-DIS), University of Paris, Paris, France, 1995.
Sheffield, J., Goteti, G., and Wood, E.: Development of a 50-Year High-Resolution Global Dataset of Meteorological Forcings for Land Surface Modeling, J. Climate, 19, 3088–3111, 2006.
Silva, R. R. D., Werth, D., and Avissar, R.: Regional impacts of future land-cover changes on the Amazon basin wet-season climate, J. Climate, 21, 1153–1170, 2008.
Skole, D. and Tucker, C.: Tropical Deforestation and Habitat Fragmentation in the Amazon: Satellite Data from 1978 to 1988, Science, 260, 1905–1910, 1993.
Snyder, P. K.: The Influence of Tropical Deforestation on the Northern Hemisphere Climate by Atmospheric Teleconnections, Earth Interact., 14, 1–34, https://doi.org/10.1175/2010EI280.1, 2010.
Soares-Filho, B. S., Nepstad, D. C., Curran, L. M., Cerqueira, G. C., Garcia, R. A., Ramos, C. A., Voll, E., McDonald, A., Lefebvre, P., and Schlesinger, P.: Modelling conservation in the Amazon basin, Nature, 440, 520–523, 2006.
Souza, E. P., Renno, N. O., and Silva-Dias, M. A. F.: Convective circulations induced by surface heterogeneities, J. Atmos. Sci., 57, 2915–2922, 2000.
Tremback, C. and Kessler, R.: A surface temperature and moisture parameterization for use in mesoscale models, Preprints, Seventh Conf. on Numerical Weather Prediction, Montreal, PQ, Canada, Amer. Meteor. Soc., 355–358, 1985.
Walcek, C. and Aleksic, N.: A simple but accurate mass conservative, peak-preserving, mixing ratio bounded advection algorithm with Fortran code, Atmos. Environ., 32, 3863–3880, 1998.
Walker, R., Moore, N., Arima, E., Perz, S., Simmons, C., Caldas, M., Vergara, D., and Bohrer, C.: Protecting the Amazon with protected areas, P. Natl. Acad. Sci. USA, 106, 10582–10586, 2009.
Walko, R., Band, L., Baron, J., Kittel, T., Lammers, R., Lee, T., Ojima, D., Pielke, R., Taylor, C., Tague, C., Tremback, C., and Vidale, P.: Coupled atmosphere-biophysics-hydrology models for environmental modeling, J. Appl. Meteorol., 39, 931–944, 2000.
Wang, D., Wang, G., and Anagnostou, E. N.: Evaluation of canopy interception schemes in band surface models, J. Hydrol., 347, 308–318, 2007.
Wang, J., Bras, R., and Eltahir, E.: The Impact of Observed Deforestation on the Mesoscale Distribution of Rainfall and Clouds in Amazonia, J. Hydrometeorol., 1, 267–286, 2000.
Wang, J., Chagnon, F., Williams, E., Betts, A., Renno, N., Machado, L., Bisht, G., Knox, R., and Bras, R.: The impact of deforestation in the Amazon basin on cloud climatology, P. Natl. Acad. Sci., 106, 3670–3674, 2009.
Williams, E. and Renno, N.: An Analysis of the Conditional Stability of the Tropical Atmosphere, Mon. Weather Rev., 121, 21–36, 1993.
Zhao, W. and Qualls, R. J.: A multiple-layer canopy scattering model to simulate shortwave radiation distribution within a homogeneous plant canopy, Water Resour. Res., 41, W08409, https://doi.org/10.1029/2005WR004016, 2005.
Zhao, W. and Qualls, R. J.: Modeling of long-wave and net radiation energy distribution within a homogeneous plant canopy via multiple scattering processes, Water Resour. Res., 42, W08436, https://doi.org/10.1029/2005WR004581, 2006.
Zimmermann, B., Elsenbeer, H., and De Moraes, J.: The influence of land-use changes on soil hydraulic properties: Implications for runoff generation, Forest Ecol. Manage., 222, 29–38, 2006.
