An integrated cryospheric–hydrologic model, FLEX-Cryo, was developed that considers glaciers, snow cover, and frozen soil and their dynamic impacts on hydrology. We utilized it to simulate future changes in cryosphere and hydrology in the Hulu catchment. Our projections showed the two glaciers will melt completely around 2050, snow cover will reduce, and permafrost will degrade. For hydrology, runoff will decrease after the glacier has melted, and permafrost degradation will increase baseflow.