The aim of this study was to develop a high-accuracy micro-lysimeter system for the quantification of non-rainfall water inputs that overcomes existing drawbacks. The micro-lysimeter system had a high accuracy and allowed us to quantify and distinguish between different types of non-rainfall water inputs, like dew and fog. Non-rainfall water inputs occurred frequently in a Swiss Alpine grassland ecosystem. These water inputs can be an important water source for grasslands during dry periods.