Articles | Volume 24, issue 9
https://doi.org/10.5194/hess-24-4257-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/hess-24-4257-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
31 Aug 2020
Research article |
| 31 Aug 2020
| 31 Aug 2020
Coalescence of bacterial groups originating from urban runoffs and artificial infiltration systems among aquifer microbiomes
Yannick Colin
CORRESPONDING AUTHOR
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
present address: UMR Morphodynamique Continentale et Côtière, CNRS 6143, Normandie University, UNIROUEN, UNICAEN, 76000 Rouen, France
Rayan Bouchali
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Laurence Marjolet
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Romain Marti
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Florian Vautrin
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
UMR Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), CNRS 5023, ENTPE, Université Claude Bernard Lyon 1, University of Lyon, 69622 Villeurbanne, France
Jérémy Voisin
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
UMR Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), CNRS 5023, ENTPE, Université Claude Bernard Lyon 1, University of Lyon, 69622 Villeurbanne, France
Emilie Bourgeois
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Veronica Rodriguez-Nava
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Didier Blaha
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
Thierry Winiarski
UMR Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), CNRS 5023, ENTPE, Université Claude Bernard Lyon 1, University of Lyon, 69622 Villeurbanne, France
Florian Mermillod-Blondin
UMR Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), CNRS 5023, ENTPE, Université Claude Bernard Lyon 1, University of Lyon, 69622 Villeurbanne, France
Benoit Cournoyer
CORRESPONDING AUTHOR
Research Team “Bacterial Opportunistic Pathogens and Environment”, UMR Ecologie Microbienne Lyon (LEM), Université Claude Bernard Lyon 1, VetAgro Sup, INRA 1418, CNRS 5557, University of Lyon, 69680 Marcy-l'Étoile, France
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Cited
9 citations as recorded by crossref.
- Mining the landfill soil metagenome for denitrifying methanotrophic taxa and validation of methane oxidation in microcosm A. Singh et al. 10.1016/j.envres.2022.114199
- Aquifer recharge by stormwater infiltration basins: Hydrological and vadose zone characteristics control the impacts of basins on groundwater chemistry and microbiology Y. Lebon et al. 10.1016/j.scitotenv.2022.161115
- Bacterial diversity and health hazards associated with resuspended road matter transported by runoff into storm and combined sewers A. Dominguez-Lage et al. 10.2166/wst.2025.080
- Seasonal effects of river flow on microbial community coalescence and diversity in a riverine network X. Luo et al. 10.1093/femsec/fiaa132
- Bacterial assemblages of urban microbiomes mobilized by runoff waters match land use typologies and harbor core species involved in pollutant degradation and opportunistic human infections R. Bouchali et al. 10.1016/j.scitotenv.2021.152662
- Runoff microbiome quality assessment of a city center rainwater harvesting zone shows a differentiation of pathogen loads according to human mobility patterns R. Bouchali et al. 10.1016/j.ijheh.2024.114391
- Soil-sediment connectivity through Bayesian source tracking in an urban naturalised waterway via microbial and isotopic markers Q. Ooi et al. 10.1016/j.scitotenv.2024.175152
- Drivers and consequences of microbial community coalescence X. Liu & J. Salles 10.1093/ismejo/wrae179
- Spatio-temporal variations in chemical pollutants found among urban deposits match changes in thiopurine S-methyltransferase-harboring bacteria tracked by the tpm metabarcoding approach A. Aigle et al. 10.1016/j.scitotenv.2021.145425
9 citations as recorded by crossref.
- Mining the landfill soil metagenome for denitrifying methanotrophic taxa and validation of methane oxidation in microcosm A. Singh et al. 10.1016/j.envres.2022.114199
- Aquifer recharge by stormwater infiltration basins: Hydrological and vadose zone characteristics control the impacts of basins on groundwater chemistry and microbiology Y. Lebon et al. 10.1016/j.scitotenv.2022.161115
- Bacterial diversity and health hazards associated with resuspended road matter transported by runoff into storm and combined sewers A. Dominguez-Lage et al. 10.2166/wst.2025.080
- Seasonal effects of river flow on microbial community coalescence and diversity in a riverine network X. Luo et al. 10.1093/femsec/fiaa132
- Bacterial assemblages of urban microbiomes mobilized by runoff waters match land use typologies and harbor core species involved in pollutant degradation and opportunistic human infections R. Bouchali et al. 10.1016/j.scitotenv.2021.152662
- Runoff microbiome quality assessment of a city center rainwater harvesting zone shows a differentiation of pathogen loads according to human mobility patterns R. Bouchali et al. 10.1016/j.ijheh.2024.114391
- Soil-sediment connectivity through Bayesian source tracking in an urban naturalised waterway via microbial and isotopic markers Q. Ooi et al. 10.1016/j.scitotenv.2024.175152
- Drivers and consequences of microbial community coalescence X. Liu & J. Salles 10.1093/ismejo/wrae179
- Spatio-temporal variations in chemical pollutants found among urban deposits match changes in thiopurine S-methyltransferase-harboring bacteria tracked by the tpm metabarcoding approach A. Aigle et al. 10.1016/j.scitotenv.2021.145425
Latest update: 13 Jul 2025
Short summary
Stormwater infiltration systems (SISs) are a source of pollution that may have adverse ecological and sanitary impacts. The incidence of a SIS on the coalescence of microbial communities from runoff waters and aboveground sediments with those of an aquifer was investigated. Aquifer waters showed lower coalescence with aboveground bacterial taxa than aquifer biofilms. These biofilms were colonized by bacterial hydrocarbon degraders and harboured undesirable human-opportunistic pathogens.
Stormwater infiltration systems (SISs) are a source of pollution that may have adverse...
