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  <front>
    <journal-meta><journal-id journal-id-type="publisher">HESS</journal-id><journal-title-group>
    <journal-title>Hydrology and Earth System Sciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">HESS</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Hydrol. Earth Syst. Sci.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1607-7938</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/hess-23-3037-2019</article-id><title-group><article-title>A new dense 18-year time series of surface water fraction estimates from
MODIS for the Mediterranean region</article-title><alt-title>A new dense 18-year time series of surface water fraction estimates</alt-title>
      </title-group><?xmltex \runningtitle{A new dense 18-year time series of surface water fraction estimates}?><?xmltex \runningauthor{L. Li et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Li</surname><given-names>Linlin</given-names></name>
          <email>l.li-1@utwente.nl</email><email>jane09gis@gmail.com</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Skidmore</surname><given-names>Andrew</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Vrieling</surname><given-names>Anton</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wang</surname><given-names>Tiejun</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Faculty of Geo-information Science and Earth Observation, University
of Twente, Enschede, the Netherlands</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department of Environmental Sciences, Macquarie University, NSW,
Australia</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Linlin Li (l.li-1@utwente.nl, jane09gis@gmail.com)</corresp></author-notes><pub-date><day>17</day><month>July</month><year>2019</year></pub-date>
      
      <volume>23</volume>
      <issue>7</issue>
      <fpage>3037</fpage><lpage>3056</lpage>
      <history>
        <date date-type="received"><day>2</day><month>January</month><year>2019</year></date>
           <date date-type="rev-request"><day>28</day><month>January</month><year>2019</year></date>
           <date date-type="rev-recd"><day>24</day><month>June</month><year>2019</year></date>
           <date date-type="accepted"><day>25</day><month>June</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 Linlin Li et al.</copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019.html">This article is available from https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019.html</self-uri><self-uri xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019.pdf">The full text article is available as a PDF file from https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e113">Detailed knowledge on surface water distribution and its
changes is of high importance for water management and biodiversity
conservation. Landsat-based assessments of surface water, such as the Global
Surface Water (GSW) dataset developed by the European Commission Joint
Research Centre (JRC), may not capture important changes in surface water
during months with considerable cloud cover. This results in large temporal
gaps in the Landsat record that prevent the accurate assessment of surface water
dynamics. Here we show that the frequent global acquisitions by the Moderate
Resolution Imaging Spectrometer (MODIS) sensors can compensate for this
shortcoming, and in addition allow for the examination of surface water changes at fine temporal resolution. To account for water bodies smaller than a MODIS
cell, we developed a global rule-based regression model for estimating the
surface water fraction from a 500 m nadir reflectance product from MODIS
(MCD43A4). The model was trained and evaluated with the GSW monthly water
history dataset. A high estimation accuracy (<inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.91</mml:mn></mml:mrow></mml:math></inline-formula>, RMSE <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">11.41</mml:mn></mml:mrow></mml:math></inline-formula> %, and MAE <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6.39</mml:mn></mml:mrow></mml:math></inline-formula> %) was achieved. We then applied the algorithm to
18 years of MODIS data (2000–2017) to generate a time series of surface
water fraction maps at an 8 d interval for the Mediterranean. From these maps
we derived metrics including the mean annual maximum, the standard deviation, and the seasonality of surface water. The dynamic surface water extent estimates
from MODIS were compared with the results from GSW and water level data
measured in situ or by satellite altimetry, yielding similar temporal
patterns. Our dataset complements surface water products at a fine spatial
resolution by adding more temporal detail, which permits the effective
monitoring and assessment of the seasonal, inter-annual, and long-term
variability of water resources, inclusive of small water bodies.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e160">Terrestrial surface water bodies such as lakes, reservoirs, and rivers cover
approximately 3 % of the global land mass. They play a crucial role in the
global hydrological cycle, biodiversity conservation, and climate process
(Chahine, 1992; Tranvik et al., 2009). Detailed knowledge on surface water
distribution, and its seasonal, inter-annual, and long-term variability can
serve as an important source for water management
(Cole et al., 2007), ecosystem assessment, and
biodiversity conservation  (Turak et al., 2017). Remote-sensing data have increasingly been used to monitor surface water changes,
and powerful methods and tools have been developed for analyzing Earth
observation data. However, existing approaches for monitoring the surface
water extent are limited either in geographic scope, temporal extent of the
record, or with respect to the temporal frequency of observations.</p>
      <p id="d1e163">At the global scale, several static datasets exist that provide information
on the spatial extent of water bodies and wetlands. For example, the Global
Lakes and Wetlands Database (GLWD: Lehner and Doll, 2004) was based on
historical maps and has a spatial resolution of 30 arcsec (approx. 1 km). Carroll et al. (2009) combined the Shuttle Radar
Topography Missions (SRTM) Water Body Data (SWBD) with 250 m Moderate
Resolution Imaging Spectrometer (MODIS) reflectance data to produce a global
static map of surface water for circa 2000–2002. Global Landsat-based static
surface water datasets include the 3 arcsec (<inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> m) Water
Body Map<?pagebreak page3038?> (G3WBM: Yamazaki et al., 2015) and the Global Land
Cover Facility (GLCF) inland surface water dataset at a 30 m resolution for
2000 (Feng et al., 2015).</p>
      <p id="d1e177">Even though static water maps are adequate for some applications there is an
increasing demand for information on the spatiotemporal variability of
inland water bodies and their long-term evolution  (Belward, 2016). Dynamic
mapping and monitoring of the surface water extent have been explored using optical
sensors featuring fine (10–30 m) to medium (250–500 m) spatial resolutions.
At fine spatial resolution, several studies have recently presented
interesting results on long-term variability of surface water with the
entire Landsat archive at regional  (Halabisky et al., 2016; Heimhuber et al., 2016), continental  (Mueller et al., 2016), and
global scales (Donchyts et al., 2016; Pekel et al., 2016). The European
Commission Joint Research Centre's (JRC) Global Surface Water (GSW) dataset
(Pekel et al., 2016) quantifies changes in global surface
water over the past 32 years with a monthly time interval. This product
allows for the analysis of surface water dynamics over long time periods at fine
spatial resolution, but only provides information on monthly changes in
surface water. Moreover, the Landsat archive also contains data gaps and
temporal discontinuities depending on the geographical location
(Pekel et al., 2016). This is due to both the limited
number of acquisitions during specific time intervals, and the location-
and time-dependent persistency of cloud cover. These data gaps affect the
accuracy of the seasonality information (Yamazaki and Trigg, 2016).
To better represent water bodies with short hydroperiods and short-duration
flooding, it is critical to account for such gaps when monitoring surface
water. In recent years, the revisit time of fine-resolution sensors has
increased  (e.g., Sentinel-2 has offered a 5 d repeat since March 2017: Du et al., 2016). However, these data cannot yet be used to create long-term
(<inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> year) consistent time series at short time intervals.</p>
      <p id="d1e191">Moderate resolution imagery derived from satellite sensors such as MODIS
provides daily observations over long time-spans and as such has the potential
to construct long-term and dense time series of surface water over large
regions. Many studies have explored the use of MODIS in mapping water body
dynamics at regional to continental scales (Kaptue et al., 2013; Pekel et al., 2014; Sharma et al., 2015) using binary classification methods. At the global
scale, Khandelwal et al. (2017) used MODIS multispectral
data to map the global extent and temporal variations of 94 large reservoirs
at a 500 m resolution and at an 8 d interval from 2000 to 2015. The recent
Global Climate Observing System (GCOS) report states that essential climate variables (ECVs) need to be established for water extent and lake ice cover
products, ideally with daily temporal resolution  (Belward, 2016). To
address this requirement, the first daily global dataset of inland water
bodies at a 250 m spatial resolution from 2013 to 2015 was developed by
Klein et al. (2017). This work advanced surface water
mapping using remote sensing, due to its dense temporal resolution, and
enhanced our understanding of rapid water changes caused by extreme climate
change and human activities. However, like other surface water mapping
efforts based on binary classification methods  (e.g., Khandelwal et al., 2017; Mohammadi et al., 2017), this product omits lakes and narrow
rivers that only cover a portion of a MODIS resolution cell.</p>
      <p id="d1e195">To overcome this limitation and incorporate small water bodies, several
researchers have attempted to predict sub-pixel surface water estimates of
MODIS by providing the water fraction in each pixel using techniques like linear
spectral mixture modeling  (e.g., Hope et al., 1999; Li et al., 2013; Olthof
et al., 2015) and machine learning  (e.g., Li et al., 2018; Rover et al., 2010; Sun et al., 2012) for small areas. However, the utility and efficiency
of these methods have rarely been explored for the estimation of the surface
water fraction for larger areas. In our previous work
(Li et al., 2018), we explored the use of rule-based
regression models over two small areas on the Iberian Peninsula and
concluded that a single global regression model can provide accurate surface
water estimates across areas with different environmental conditions as long
as it is fed with training data that comprise these various conditions.
Consequently, we concluded that this approach has the potential to be applied
over much larger areas. Therefore, the aim of this paper is to explore the
utility and efficiency of a rule-based regression model for the estimation of the surface water fraction for the Mediterranean region, and to develop a new
surface water fraction dataset for the Mediterranean region using fine
temporal resolution MODIS data as input for the effective assessment of
seasonal, intra-annual, and long-term surface water dynamics inclusive of
small water bodies. Our specific objectives are as follows:
<list list-type="order"><list-item>
      <p id="d1e200">to develop an approach for the estimation of the surface water fraction for
the Mediterranean region at a fine temporal resolution from MODIS data;</p></list-item><list-item>
      <p id="d1e204">to generate an 8 d interval time series of surface water fraction maps
for the Mediterranean from 2000 to 2017, and to use that to derive a series
of ecologically relevant metrics;</p></list-item><list-item>
      <p id="d1e208">to compare our dataset with an existing dataset (i.e., JRC's GSW) and
water level data to assess how they compare in space and time.</p></list-item></list></p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Study area</title>
      <p id="d1e219">We loosely defined the Mediterranean in this study as the region that is
contained within 10 MODIS grid tiles, which together cover all coastal
areas of the Mediterranean and the Black Sea, including a significant portion of
their inland areas (Fig. 1). This boundary is defined based on the
combination of (1) the definition of the Mediterranean region by the
Mediterranean Wetland Observatory (MWO) project, i.e., 27<?pagebreak page3039?> Mediterranean
countries are included by MWO; (2) the inclusion of areas with a large
amount of Ramsar wetlands; and (3) the exclusion of southern parts of north
African countries (i.e., Morocco, Algeria, Libya, and Egypt) that comprise few
water bodies according to the maximum water extent over 32 years from JRC's
GSW product.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e224">Study area and sample locations.</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f01.png"/>

      </fig>

      <p id="d1e233">The study region covers 13 climate zones as defined by Peel et al. (2007) (Fig. 1). Numerous water bodies of
different types are found in this region, including large coastal lagoons,
fresh, brackish or salt marshes, riverine forests and reed beds, flood
plains and wet meadows, mountainous lakes and surrounding wetlands, salted
lakes, temporary marshes, and streams  (Costa et al., 1996). Our study
area accounts for 25 %  of the world's Ramsar sites that
contain a great ecological, social, and economic value, especially as they
provide habitat, reproduction, and migration stopover sites for numerous bird
species (Galewski, 2012). A good number of the water bodies and wetlands
in the region are small, shallow, and highly variable between seasons and
years due to weather effects and human activities (Costa et al., 1996).</p>
      <p id="d1e237">Many Mediterranean water resources are degraded mainly due to urbanization,
agricultural reclamation, increasing water use for irrigation, and hydraulic
works such as dams, dikes, river channeling, and drainage and irrigation
networks  (Batalla et al., 2004). A number of projects
and programs have performed monitoring of surface water and wetlands in the
Mediterranean region, such as MWO (<uri>http://medwet.org/</uri>, last access: 10 July 2019) and the GlobWetland
initiative (<uri>http://webgis.jena-optronik.de/</uri>, last access: 10 July 2019), which highlighted the importance
of protecting Mediterranean water resources. However, these projects either
performed wetland mapping for a few moments in time (e.g., GlobWetland only
covered 1975, 1990, and 2005), or were limited to specific water bodies and
wetlands instead of the whole landscape. Although surface water dynamics in
the Mediterranean can be analyzed at fine spatial resolution with JRC's GSW,
it has large spatial and temporal gaps. Figure 2 shows the percentage of
pixels with valid observations in JRC's GSW monthly water history dataset for
each month between January 2000 and October 2015 calculated over the entire
Mediterranean area. The figure illustrates that no valid observation exists
for December in the years 2000–2015 in Mediterranean areas according to the
GSW monthly water history map. In addition, less than 10 % of the
Mediterranean area has observations for January.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e248">Percentage of pixels with valid observations in JRC's
Global Surface Water (GSW) monthly water history dataset for each month
between January 2000 and October 2015, taken as a spatial average for the
entire Mediterranean region as displayed in Fig. 1.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f02.png"/>

      </fig>

</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Data</title>
      <p id="d1e265">Table 1 summarizes all datasets used in this study. They include a number
of sources used to derive model input variables, training data for building
the model, validation data for model accuracy assessment, and other existing
surface water products against which we compared our products. Details are
provided in the following sections.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e271">Input and reference datasets used in the study.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="170.716535pt"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="184.942913pt"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Data/product name</oasis:entry>
         <oasis:entry colname="col2">Temporal</oasis:entry>
         <oasis:entry colname="col3">Spatial</oasis:entry>
         <oasis:entry colname="col4">Purpose in the study</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">resolution</oasis:entry>
         <oasis:entry colname="col3">resolution</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MCD43A4, V006 (MODIS/Terra and Aqua <?xmltex \hack{\hfill\break}?>nadir BRDF-adjusted reflectance)</oasis:entry>
         <oasis:entry colname="col2">Daily</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">Generation of predictor variables and production of time series of water fraction maps</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MCD43A2, V006 (MODIS/Terra and Aqua <?xmltex \hack{\hfill\break}?>BRDF/albedo quality)</oasis:entry>
         <oasis:entry colname="col2">Daily</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">Snow and ice mask</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">GSW monthly water history dataset</oasis:entry>
         <oasis:entry colname="col2">Monthly</oasis:entry>
         <oasis:entry colname="col3">30 m</oasis:entry>
         <oasis:entry colname="col4">Generation of training and validation datasets, and thematic products</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">GSW maximum water extent map</oasis:entry>
         <oasis:entry colname="col2">Static</oasis:entry>
         <oasis:entry colname="col3">30 m</oasis:entry>
         <oasis:entry colname="col4">Define sampling strata; exclusion of non-water samples from training locations</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">GSW water transitions map</oasis:entry>
         <oasis:entry colname="col2">Static</oasis:entry>
         <oasis:entry colname="col3">30 m</oasis:entry>
         <oasis:entry colname="col4">Define sampling strata</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Digital elevation model from Shuttle Radar <?xmltex \hack{\hfill\break}?>Topography Mission (SRTM) 3 v4.1</oasis:entry>
         <oasis:entry colname="col2">Static</oasis:entry>
         <oasis:entry colname="col3">90 m</oasis:entry>
         <oasis:entry colname="col4">Generation of predictor variables; identification of sloping terrain and terrain shadows</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">USGS Landsat archive</oasis:entry>
         <oasis:entry colname="col2">16 d</oasis:entry>
         <oasis:entry colname="col3">30 m</oasis:entry>
         <oasis:entry colname="col4">Link the GSW monthly history datasets to a single date of cloud-free Landsat acquisition because the exact date of observation is not included in the GSW dataset</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MCD12Q1 (MODIS land cover type product)</oasis:entry>
         <oasis:entry colname="col2">Static</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">Identification of building shadows</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Land water mask derived from MODIS and SRTM (MOD44W)</oasis:entry>
         <oasis:entry colname="col2">Static</oasis:entry>
         <oasis:entry colname="col3">250 m</oasis:entry>
         <oasis:entry colname="col4">Comparison of products</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Water level from satellite altimetry</oasis:entry>
         <oasis:entry colname="col2">10 d</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">Validation of results</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Water level from in situ</oasis:entry>
         <oasis:entry colname="col2">Daily</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">Validation of results</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\newpage}?>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>MODIS data</title>
      <p id="d1e504">The main input dataset in this study is the MODIS Terra and Aqua nadir
BRDF-adjusted reflectance (NBAR) product (MCD43A4, V006). This product
provides 500 m resolution surface reflectance data for each of the MODIS
bands (1–7) corrected to a common nadir view geometry at the local solar
noon zenith angle using a bidirectional reflectance distribution function
(BRDF) model (Schaaf, 2015b). Compared with the previous collection (V005)
that had an 8 d frequency, the V006 collection was retrieved on a daily
basis. Each daily value is a result of compositing information obtained
during 16 d of observations, which are weighted as a function of the
quality, the observation coverage, and the temporal distance from the day of
interest. Each daily V006 retrieval is the center (i.e., the ninth day) of the
moving 16 d input window (Schaaf, 2015b). We also used the MCD43A2
(V006) Bidirectional Reflectance Distribution Function and Albedo
(BRDF/Albedo) Quality dataset to filter out pixels with snow and ice in the
MCD43A4 product. This dataset has the same temporal and spatial resolution
as MCD43A4 (i.e., daily 500 m resolution), and contains quality information
for the corresponding MCD43A4 NBAR product including snow and ice presence
(Schaaf, 2015a).</p>
      <p id="d1e507">For this study, we downloaded the daily files of MCD43A4 and MCD43A2 for
2000, 2003, 2006, 2009, 2012, and 2015. As explained in Sect. 4.1, all the
available dates (or months) of the GSW monthly water history dataset in
these 6 years over the sample locations were used for building training
and validation data. Instead, when producing the surface water fraction time
series, we collected the MCD43A4 and MCD43A2 files using an 8 d time step
from February 2000 to December 2017, as processing daily files for the
large study area and the 18-year time period would become too time- and
memory-consuming. The 8 d repeat coverage is considered to be a minimum
for effectively capturing water bodies with short hydroperiods while
simultaneously accounting for frequent cloud cover  (Guerschmann et al., 2011; Wulder et al., 2016). All images were downloaded from the NASA
Earthdata Search website (<uri>https://search.earthdata.nasa.gov/search</uri>, last access: 10 July 2019).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Global Surface Water (GSW) dataset</title>
      <p id="d1e521">To generate training and validation data for modeling the surface water
fraction, we used the GSW dataset (Pekel et al., 2016).
This dataset provides the global distribution of the surface water extent at a monthly
time interval from March 1984 to October 2015 (380 months) at a 30 m spatial
resolution, and also includes a series of thematic maps summarizing
different facets of the spatial and temporal dynamics of surface water over
32 years. This dataset is derived from the entire archive of Landsat 5
Thematic Mapper (TM), the Landsat 7 Enhanced Thematic Mapper-plus (ETM<inline-formula><mml:math id="M6" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>),
and the Landsat 8 Operational Land Imager (OLI).<?pagebreak page3040?> Water detection was
performed using a dedicated expert system, which was a procedural sequential
decision tree that used both the multispectral and multitemporal attributes of
the Landsat archive as well as ancillary data layers  (Pekel et al., 2016).
Based on a validation with very high resolution satellite and aerial
imagery, the authors reported a high mapping accuracy with a commission
accuracy of 99.45 % and an omission accuracy of 97.01 %
(Pekel et al., 2016).</p>
      <p id="d1e531">The GSW monthly water history dataset is available in Google Earth Engine
(GEE: Gorelick et al., 2017) as an image collection
containing 380 images, one for each month between March 1984 and October 2015. Each image provides a binary classification of water presence, or
indicates if no valid (cloud-free) Landsat
observations were available for a specific pixel and month. For comparison with MODIS data, we used the
monthly water history datasets between February 2000 and October 2015, which
resulted in 189 images.</p>
      <p id="d1e534">Several GSW thematic maps were derived from the GSW monthly water history
dataset (Pekel et al., 2016). In this study, we used two
thematic maps, the maximum water extent map and the water transitions map,
for the Mediterranean region from the data access website
(<uri>https://global-surface-water.appspot.com/download</uri>, last access: 10 July 2019). The maximum water
extent map indicates whether each 30 m grid cell was ever detected as water over the 32-year period. The transition map contains 10 water classes:
permanent, new permanent, lost permanent, seasonal, new seasonal, lost
seasonal, seasonal to permanent, permanent to seasonal, ephemeral permanent,
and ephemeral seasonal. It provides information on both intra- and
inter-annual variability of surface water (Pekel et al., 2016).</p>
</sec>
<?pagebreak page3041?><sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Terrain data</title>
      <p id="d1e548">Terrain data are useful for predicting the locations for water bodies  (Drake
et al., 2015; Grabs et al., 2009). In this study, we used the near-global
Shuttle Radar Topography Mission (SRTM) digital elevation model (DEM)
distributed by the Consortium for Spatial Information of the Consultative
Group of International Agricultural Research (CGIAR-CSI). This product has a
<inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> m resolution and is a post-processed derivative to address areas
of missing data in the original SRTM DEM made by the National Aeronautics
and Space Administration (Jarvis et al., 2008). The most
recent version of this product is SRTM3 v4.1 and is freely available from
<uri>http://srtm.csi.cgiar.org/</uri> (last
access: 10 July 2019).</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Satellite altimetry and in situ water level</title>
      <p id="d1e573">We obtained water levels from the U.S. Department of Agriculture Global
Reservoir and Lake Monitoring (GRLM) website
(<uri>http://www.pecad.fas.usda.gov/cropexplorer/global_reservoir</uri>, last access: 10 July 2019). This site provides time series of water level variations for
some of the world's largest lakes and reservoirs, mainly greater than 100 km<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>. The GRLM utilizes near-real time data from the Jason-3 mission,
and archive data from the Jason-2/OSTM, Jason-1, Topex/Poseidon, and ENVISAT
satellites. We also obtained daily in situ gauge observations for Fuente de
Piedra Natural Reserve in southern Spain, which were also used in Li et al. (2015).</p>
</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Additional data</title>
      <p id="d1e596">We utilized the MODIS land cover type product (i.e.,
MCD12Q1: Friedl et al., 2010) to identify and mask areas that potentially
have commission errors related to building shadows. To assess the spatial
accuracy of MODIS derived maps, we also used the land water mask derived
from MODIS 250 m and SRTM data  (MOD44W: Salomon et al., 2004) for
comparison.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Method</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Approach for deriving the surface water fraction</title>
      <p id="d1e615">The approach used to derived the surface water fraction builds on our previous
work  (Li et al., 2018) with considerable improvements
regarding input data, training data, and commission error processing. We
explored the use of MODIS spectral information and a topographic metric for
estimating the surface water fraction over two study areas in<?pagebreak page3042?> Spain via the
use of rule-based regression models and concluded that a single global
regression model can be effectively tuned locally as long as it is fed with
training data that comprise the various environmental conditions encountered
across the larger area  (Li et al., 2018). In this sense,
the approach for constructing a global model can be expanded effectively to
wider areas such as the Mediterranean region. The following subsections and
Fig. 3 describe the individual steps of the approach in detail.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e620">Diagram of our approach for deriving the surface water
fraction.</p></caption>
          <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f03.png"/>

        </fig>

<sec id="Ch1.S4.SS1.SSS1">
  <label>4.1.1</label><title>Selection of sample locations for training and validation</title>
      <p id="d1e636">Sample locations were selected using a two-stage stratified random sampling
method. First, a total of 13 strata were defined based on climate zones (see
Fig. 1). We created sampling blocks by partitioning the study area into
<inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> km <inline-formula><mml:math id="M10" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 5 km grids (i.e., <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> MODIS pixels as one block) and
assigned each block to the climate zone within its spatial footprint. Blocks
that covered more than one climate zone and those that contained no surface
water based on the JRC maximum water extent product were excluded from our
sample. We then selected 1400 blocks (<inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> % of all resulting
blocks) using stratified random sampling.</p>
      <p id="d1e680">Second, we created 500 m <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula> m grids corresponding to the MODIS geometry in
each of the 1400 blocks. A total of 14 strata were defined based on the
combination of water fraction categories and water permanence types.
Specifically, we first divided all grid cells into seven water fraction
categories (0 %, 0 %–20 %, 20 %–40 %, 40 %–60 %,
60 %–80 %, 80 %–100 %, and 100 %) according to the aggregated GSW
maximum water extent. Then for each category, we further classified water
permanence types based on the aggregated GSW water transitions map. For the
20 %–40 %, 40 %–60 %, 60 %–80 %, 80 %–100 %, or 100 %
categories, grid cells were further classified as fluctuating water if they
contained more than 20 % fluctuation water otherwise they were assigned as
permanent water. For the 0 %–20 % category, grids with 0 % permanent
water were classified as fluctuating water, whereas grids with 0 %
fluctuation water were classified as permanent water. The rest of the grids
in the 0 %–20 % category were not assigned due to a very low water
fraction. In the end, the 14 strata were as follows: 100 % permanent, 100 %
fluctuating, 80 %–100 % permanent, 80 %–100 % fluctuating,
60 %–80 % permanent, 60 %–80 % fluctuating, 40 %–60 %
permanent, 40 %–60 % fluctuating, 20 %–40 % permanent,
20 %–40 % fluctuating, 0 %–20 % permanent, 0 %–20 %
fluctuating, 0 %–20 % no water class, and 0 % no water class. From
each of the 14 strata, we randomly selected 500 grid cells. This resulted in
a set of 7000 MODIS-scale reference grid cells (shown in Fig. 1), which were
further split into 3500 training and 3500 validation locations using random
sampling from each strata.</p>
      <p id="d1e693">Sampling times were selected at a constant interval of 3 years (i.e.,
2000, 2003, 2006, 2009, 2012, and 2015). All available dates/months in the
GSW monthly history datasets from those selected years were used.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <label>4.1.2</label><title>Building training and validation datasets</title>
      <p id="d1e705">The GSW monthly water history maps were used for generating training and
validation data. Specifically, the 30 m monthly water history maps from all
sampling years/months were aggregated to the 500 m resolution for all sample
locations in GEE by dividing the 30 m water pixels by the total number of
30 m pixels within each 500 m resolution cell, resulting in a surface water
fraction that we used as a reference. Given that the exact dates of these
monthly water history maps are not provided with the GSW product, we linked
these reference estimates to the USGS Landsat archive that GSW used as its
input. For each combination of location/month, we retained only those
reference estimates for which the location was covered by a single Landsat
tile acquired during that month. If multiple Landsat tiles existed in that
month for that location, we only retained the reference estimates if all but
one Landsat tile had 100 % cloud cover. In this way, we could accurately
assign a precise date to the retained reference estimates.</p>
      <p id="d1e708">Surface water fraction estimates derived from all months of the sample years
for training locations were used as the training dataset, and the estimates
from all sample months for validation locations were used as the validation
dataset.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS3">
  <label>4.1.3</label><title>Modeling surface water fraction and accuracy assessment</title>
      <p id="d1e719">The surface water fraction was estimated using MODIS spectral information and
derived water indices, and a topographic metric via a rule-based
regression model. All predictor variables (Table 2) evaluated by
Li et al. (2018) were used as input for the estimation
of surface water fraction. In addition, the annual mean, minimum, maximum,
standard deviation, and the coefficient of variation (CV) of each MODIS-derived predictor variable were also included as input in the model. These temporal
summaries were demonstrated to be an important input for predicting surface
water fraction in our previous study  (Li et al., 2018).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e725">Overview of the predictor variables used in this study.
MODIS shortwave infrared bands are referred to as SWIR<inline-formula><mml:math id="M14" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula> (1230–1250 nm),
SWIR<inline-formula><mml:math id="M15" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (1628–1652 nm), and SWIR<inline-formula><mml:math id="M16" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> (2105–2155 nm).</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.97}[.97]?><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="135pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="252pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Predictor variable</oasis:entry>
         <oasis:entry colname="col2">Formula</oasis:entry>
         <oasis:entry colname="col3">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MODIS individual bands (red, NIR, blue, green, SWIR<inline-formula><mml:math id="M17" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula>, SWIR<inline-formula><mml:math id="M18" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, and SWIR<inline-formula><mml:math id="M19" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">–</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">NDVI – normalized difference vegetation index</oasis:entry>
         <oasis:entry colname="col2">(NIR <inline-formula><mml:math id="M20" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> red) <inline-formula><mml:math id="M21" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (NIR <inline-formula><mml:math id="M22" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> red)</oasis:entry>
         <oasis:entry colname="col3">Tucker (1979)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">NDWI – normalized difference water index</oasis:entry>
         <oasis:entry colname="col2">(green <inline-formula><mml:math id="M23" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> NIR) <inline-formula><mml:math id="M24" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (green <inline-formula><mml:math id="M25" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NIR)</oasis:entry>
         <oasis:entry colname="col3">McFeeters (1996)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MNDWI – modified normalized difference water index</oasis:entry>
         <oasis:entry colname="col2">(green <inline-formula><mml:math id="M26" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M27" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>) <inline-formula><mml:math id="M28" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (green <inline-formula><mml:math id="M29" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M30" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">Xu (2006)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">NDWI – normalized difference water index (referred as LSWI<inline-formula><mml:math id="M31" display="inline"><mml:msub><mml:mi/><mml:mrow><mml:mi mathvariant="normal">B</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">(NIR <inline-formula><mml:math id="M32" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M33" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula>) <inline-formula><mml:math id="M34" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (NIR <inline-formula><mml:math id="M35" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M36" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">Gao (1996)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">LSWI – land surface water index (referred as LSWI<inline-formula><mml:math id="M37" display="inline"><mml:msub><mml:mi/><mml:mrow><mml:mi mathvariant="normal">B</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">(NIR <inline-formula><mml:math id="M38" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M39" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>) <inline-formula><mml:math id="M40" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (NIR <inline-formula><mml:math id="M41" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M42" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">Xiao et al. (2002)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">TCWI – tasseled cap wetness index</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.10839</mml:mn><mml:mo>⋅</mml:mo></mml:mrow></mml:math></inline-formula> red <inline-formula><mml:math id="M44" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0912 <inline-formula><mml:math id="M45" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> NIR <inline-formula><mml:math id="M46" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.5065 <inline-formula><mml:math id="M47" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> blue <inline-formula><mml:math id="M48" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.404 <inline-formula><mml:math id="M49" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> green <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.241</mml:mn></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?> <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mo>⋅</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.4658</mml:mn><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5306</mml:mn><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Zhang et al. (2002)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">TCBI – tasseled cap brightness index</oasis:entry>
         <oasis:entry colname="col2">0.3956 <inline-formula><mml:math id="M52" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> red <inline-formula><mml:math id="M53" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.4718 <inline-formula><mml:math id="M54" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> NIR <inline-formula><mml:math id="M55" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.3354 <inline-formula><mml:math id="M56" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> blue <inline-formula><mml:math id="M57" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M58" display="inline"><mml:mn mathvariant="normal">0.3834</mml:mn></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?> <inline-formula><mml:math id="M59" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> green <inline-formula><mml:math id="M60" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.3946 <inline-formula><mml:math id="M61" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula> 0.3434 <inline-formula><mml:math id="M63" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.2964</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M65" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> SWIR<inline-formula><mml:math id="M66" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Zhang et al. (2002)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Value (HSV)</oasis:entry>
         <oasis:entry colname="col2">max(SWIR<inline-formula><mml:math id="M67" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, NIR, red)</oasis:entry>
         <oasis:entry colname="col3">Pekel et al. (2014)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Saturation (HSV)</oasis:entry>
         <oasis:entry colname="col2">1 <inline-formula><mml:math id="M68" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> min(SWIR<inline-formula><mml:math id="M69" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, NIR, red)<inline-formula><mml:math id="M70" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula>max(SWIR<inline-formula><mml:math id="M71" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, NIR, red)</oasis:entry>
         <oasis:entry colname="col3">Pekel et al. (2014)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Hue (HSV)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M72" display="inline"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">min</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">red</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">red</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi>V</mml:mi><mml:mo>-</mml:mo><mml:mo>min⁡</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">red</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mn mathvariant="normal">360</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:mfenced><mml:mi mathvariant="normal">mod</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">360</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>,</mml:mo><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">red</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi>V</mml:mi><mml:mo>-</mml:mo><mml:mo>min⁡</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">red</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mn mathvariant="normal">120</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi>V</mml:mi><mml:mo>-</mml:mo><mml:mo>min⁡</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="normal">SWIR</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">NIR</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">red</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mn mathvariant="normal">240</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>V</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">red</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Pekel et al. (2014)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TWI – topographic wetness index</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mi>ln⁡</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>tan⁡</mml:mi><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>;</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:math></inline-formula> is the upslope area per unit contour length (m), which is calculated as (flow accumulation <inline-formula><mml:math id="M74" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1) <inline-formula><mml:math id="M75" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> (cell size); <inline-formula><mml:math id="M76" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> is the slope expressed in radians</oasis:entry>
         <oasis:entry colname="col3">Beven and Kirkby (1979)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <?pagebreak page3043?><p id="d1e1733">Cubist regression models (Quinlan, 1993) contain a set of conditional
rules that partition the data space into smaller regions, each of which is
linked to a multivariate linear regression model that can predict the
explanatory variable (here surface water fraction). Following the findings
of our earlier work (Li et al., 2018), we used a single global Cubist
regression model, but trained it with data collected from across the study
area to tune the model to local conditions. In the global Cubist regression
model, two parameters can be defined to optimize accuracy and reduce the
instability of the model prediction. The first is called “committees”
indicating that multiple model trees are developed in sequence. Each member
of the committee predicts the target value and the members' predictions are
averaged to give a final prediction (Quinlan, 1993). The second parameter
is “neighbors” and allows the Cubist model to group similar samples in
terms of predictor variable values, and determine the average prediction of
these training samples (Kuhn et al., 2012; Quinlan, 1993). We tuned the
models over different values of “committees” and “neighbors”
(“committees” was set to be 0, 10 , 20, 50, and 100, and “neighbors” was set
to be 0, 1, 5, and 9) through a 10-fold cross-validation on our training data
and selected the values that produced the smallest root mean square error
(RMSE).</p>
      <p id="d1e1737">The resulting model was evaluated on both the training data that were used
to generate the model and the independent validation data (Sect. 4.1.2).
Three statistical measures were used to assess model performance: the
coefficient of determination (<inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>), mean absolute error (MAE), and the RMSE.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS4">
  <label>4.1.4</label><title>Mapping and post-processing</title>
      <p id="d1e1759">We applied the resulting model to the MCD43A4 V006 data from February 2000
to December 2017 to produce gridded time series of surface water fraction
for the Mediterranean region with an 8 d time step resulting in 46 maps
per year (except for 2000, which only contained 39 images).</p>
      <p id="d1e1762">Recent studies on surface water detection using optical sensors showed that
multiple sources of commission errors exist, such as terrain and building
shadows (Klein et al., 2017; Pekel et al., 2016). These errors can be
accounted for using masks derived from auxiliary data  (Klein et al., 2017; Pekel et al., 2016). In this study we addressed two sources of
commission errors: shadows from buildings and identified surface water
presence that is unlikely on sloping terrain. Specifically, a slope map was
derived from the SRTM DEM by calculating the maximum rate of change in
elevation from each raster cell to their eight neighbors. We then used a
threshold of 5<inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> to identify steep locations where it is unlikely to find surface water but could have been<?pagebreak page3044?> detected as water by our model, for example, due to spectral confusion between water and terrain
shadows (Yamazaki et al., 2015). In the case of building
shadows, we used the urban class of the MODIS classification product MCD12Q1 (Friedl et al., 2010) to assign areas potentially affected by
building-induced shadows. Pixels were reassigned to the 0 % water
fraction for slopes steeper than 5<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and for areas
classified as urban in MCD12Q1, except for places where water was
present according to the GSW maximum water extent.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e1786">Seasonality classification criteria based on surface water
fraction and occurrence. The occurrence indicates how often the specified
surface water fraction is reached for a single hydrological year (October
2014–September 2015).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Class name</oasis:entry>
         <oasis:entry colname="col2">Surface water fraction</oasis:entry>
         <oasis:entry colname="col3">Water occurrence</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Permanent water</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Semipermanent water</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col3">70 %–90 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Intermittent water</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col3">20 %–70 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Infrequent inundation</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col3">1 %–20 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mixed permanent and semipermanent water</oasis:entry>
         <oasis:entry colname="col2">30 %–70 %</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mixed intermittent water</oasis:entry>
         <oasis:entry colname="col2">30 %–70 %</oasis:entry>
         <oasis:entry colname="col3">20 %–70 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mixed infrequent inundation</oasis:entry>
         <oasis:entry colname="col2">30 %–70 %</oasis:entry>
         <oasis:entry colname="col3">1 %–20 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Never inundated</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mi mathvariant="italic">&lt;</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Generation of the surface water fraction metrics and comparison of products</title>
      <p id="d1e1997">Based on gridded time series of surface water fraction, we derived a series
of ecologically relevant metrics that capture both the intra- and
inter-annual variability and changes, and further compared these metrics
with GSW-derived thematic products. The readily available GSW thematic
products were derived from 32 years of data (between March 1984 and October
2015); thus, they cannot be directly compared against our MODIS-based results for
2000–2017. Therefore, we reproduced the GSW thematic maps using the GSW
monthly water history dataset from the overlapping period of these two
datasets (i.e., February 2000–October 2015). We then also computed the
MODIS-derived temporal metrics for this period. In total, 189 GSW water
history images and 720 surface water fraction maps were incorporated for the
generation of these thematic maps. The following metrics were generated:
<list list-type="order"><list-item>
      <p id="d1e2002"><italic>The annual maximum and mean annual maximum surface water fraction between 2000 and 2015: the GSW monthly water history maps were summarized for each year in GEE to calculate the annual maximum surface water extent</italic>. We then
aggregated the results of each year to the MODIS resolution and averaged all
years to derive the mean annual maximum surface water fraction. To assess
the spatial agreement of the mean annual maximum surface water fraction
derived from MODIS and GSW, we calculated the surface water area (in km<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>)
from the mean annual maximum surface water fraction using a threshold
continuum. Specifically, the surface water fraction was partitioned using
nine threshold values set in 10 % increments from 0 % to 100 %. All
pixels with a surface water fraction greater than or equal to the threshold
were summed and then multiplied by the MODIS pixel size. We then compared
the water area (in km<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>) derived from the mean annual maximum surface water
fraction based on GSW and MODIS across a different continuum of threshold
values. We also compared the water area with the 250 m static water mask
from MOD44W.</p></list-item><list-item>
      <p id="d1e2026"><italic>The standard deviation of the annual maximum: a measure of the inter-annual variability of water presence</italic>.</p></list-item><list-item>
      <p id="d1e2032"><italic>The seasonality: a measure for the seasonal and intra-annual variability of water presence</italic>. We calculated the number of times (i.e., the water
occurrence) a given pixel displayed standing water above a certain water
fractional threshold for a single hydrological year (October 2014 to
September 2015), as GSW has a relatively large number of valid observations
for this year (Fig. 2), and then classified different types of water
permanence. The water occurrence was calculated for each grid cell as a
fraction of the number of times water was present relative to the total
valid observations (i.e., not affected by clouds). We adopted the
classification criteria of Guerschmann et al. (2011) and further
modified it to be applicable to the Mediterranean region (Table 3). As the
classes are not mutually exclusive, they are prioritized in the order shown
in Table 3.</p></list-item></list></p>
</sec>
<?pagebreak page3045?><sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Demonstrating the representation of surface water dynamics by the new
MODIS dataset</title>
      <p id="d1e2045">To assess the performance of our MODIS-derived product for monitoring
temporal variations in the surface water extent, we selected three lakes with
fluctuating water presence. These three sites have varying sizes, and different geographic locations and temporal dynamics, and have also been listed in the
International Conventions on Wetlands (known as Ramsar) given their
importance for staging and wintering waterfowl. The three sites are as follows:
<list list-type="order"><list-item>
      <p id="d1e2050">The Fuente de Piedra lake, Spain, which is a shallow and saline lake, has a maximum area
of 13.6 km<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>. It experiences strong seasonal, inter-annual, and intra-annual variations of water level and inundation extent  (Li et al., 2015).</p></list-item><list-item>
      <p id="d1e2063">Lake Sabkhat al-Jabbul, Syria, which is a large, permanent saline lake that is
surrounded by semiarid steppe. At high water levels, it contains two
islands; it traditionally floods in the spring and shrinks back during the
summer and autumn but seldom dries out completely  (JAES-CC, 2010).</p></list-item><list-item>
      <p id="d1e2067">The coastal marshland complex of Doñana, Spain, which is separated from the
ocean by an extensive dune system and is subject to seasonal and inter-annual variations in water level (De Castro and Reinoso,
1997).</p></list-item></list>
For the first two lakes, we compared the time series of the MODIS-derived surface water area with that from GSW, and further compared these against
water level data from satellite altimetry or in situ measurements. We
calculated the Spearman rank correlation (<inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula>) between water level and
water area derived from MODIS SWF and JRC's GSW data to assess the
correspondence between these datasets. For Doñana, we compared the
monthly spatial distribution of the surface water extent derived from MODIS and JRC's GSW. To ensure the accuracy of the area calculations, we only
calculated an area for times when it contained at least 95 % of valid data from MODIS SWF and JRC's GSW data.</p>
</sec>
</sec>
<?pagebreak page3046?><sec id="Ch1.S5">
  <label>5</label><title>Results</title>
<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Model performance</title>
      <p id="d1e2095">Following the model tuning of the Cubist regression model (see Sect. 4.1.3), we found that a 20-member committee and 9-neighbor model resulted in
the smallest RMSE between the actual (GSW-derived) water fraction and our
MODIS-based water fraction estimates. The addition of more committees or
neighbors had little effect on the accuracy.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e2100">Mean annual maximum surface water fraction maps as
obtained from <bold>(a)</bold> JRC's GSW and <bold>(b)</bold> MODIS time series surface water fraction
for the period from 2000 to 2015, and <bold>(c)</bold> the difference between the two maps. Positive
difference values indicate that our MODIS dataset detected a larger water
fraction than JRC's GSW.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f04.png"/>

        </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e2121">Statistical measures between the predicted surface water
fraction and the actual data for training and validation data, and for different
types of water permanence using validation data.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">RMSE (%)</oasis:entry>
         <oasis:entry colname="col4">MAE (%)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Training data</oasis:entry>
         <oasis:entry colname="col2">0.93</oasis:entry>
         <oasis:entry colname="col3">9.79</oasis:entry>
         <oasis:entry colname="col4">5.61</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Validation data</oasis:entry>
         <oasis:entry colname="col2">0.91</oasis:entry>
         <oasis:entry colname="col3">11.41</oasis:entry>
         <oasis:entry colname="col4">6.39</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Permanent water</oasis:entry>
         <oasis:entry colname="col2">0.90</oasis:entry>
         <oasis:entry colname="col3">12.07</oasis:entry>
         <oasis:entry colname="col4">6.38</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Fluctuating water</oasis:entry>
         <oasis:entry colname="col2">0.85</oasis:entry>
         <oasis:entry colname="col3">12.60</oasis:entry>
         <oasis:entry colname="col4">8.11</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2228">Table 4 shows the statistical measures between the predicted and
actual surface water fraction. The model predicted surface water fraction shows good agreement with the actual value with an <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.93 for the
training data. When testing using the independent validation dataset,
the <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> value is only slightly smaller, and the RMSE and MAE are slightly larger,
suggesting that the Cubist regression model does not suffer from
overfitting. The RMSE and MAE for fluctuating water were slightly larger than for permanent water (Table 4). This suggests that the developed
model not only provides accurate results for the static mapping of the surface water fraction, but it can also be applied effectively for monitoring the dynamics of fluctuating surface water.</p>
</sec>
<sec id="Ch1.S5.SS2">
  <label>5.2</label><title>Surface water fraction metrics and comparison of products</title>
      <p id="d1e2261">The mean annual maximum surface water fraction values generated from GSW and the MODIS-derived product over the 2000–2015 period are displayed in Fig. 4.
Overall, the two maps are in good agreement. Visual comparison indicates
that our MODIS-derived product is able to detect narrow rivers with widths
covering a couple of MODIS pixels, such as the Danube, Euphrates, Po,
Rhine, and Tagus rivers. Large differences are evident for some low surface water fraction regions such as parts of Hungary and the Ukraine (Fig. 4). These differences likely correspond to the presence of wet meadows, salt marshes,
and floodplains along large rivers, which are usually saturated and
inundated with water during most of the vegetative season
(Šefferová Stanová et al., 2008; Stefan et al., 2016). Around
the Po River in Italy, where rice paddies are seasonally present, our MODIS
product also shows larger surface water fractions (Fig. 4c). This result
suggests that the MODIS-derived surface water fraction has enhanced
sensitivity to surface water in wetland areas with emerged vegetation, and
this could be attributed to the fact that several predictor variables such as
LSWI  (Xiao et al., 2002) are also sensitive to
vegetation water content  (Li et al., 2015). Table 5 confirms that the total surface water areas for the Mediterranean calculated
from MODIS are more comparable to the GSW results when only considering
areas with a higher surface water fraction. For example, when only accounting
for pixels with surface water fractions equal to or greater than 50 %, the total surface water areas for the Mediterranean based on both datasets are
similar (75 107 km<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> for GSW versus 73 444 km<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> for MODIS). In
comparison, only 70 543 km<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> of water was detected in this region based on the 250 m static water mask from MOD44W. This implies that our MODIS product
detects more surface water than other coarse-resolution binary maps.
Nonetheless, our MODIS product detects less surface water than GSW
for larger thresholds (<inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> %), whereas it detects much more surface
water than GSW for small thresholds (<inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> %). This confirms an earlier
finding that machine learning approaches such as Cubist and random forest
often underestimate large values and overestimate small values when
estimating the fractional cover of land surface  (e.g., Huang et al., 2014; Li et al., 2018; Wang et al., 2017). In addition to the effects of mixed pixels (Klein et al., 2017), the most obvious reason for this is because regression
techniques used in such approaches fit linear equations to relationships
that may not be linear over the entire range of values.</p>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e2314">Comparison of total surface water area (in km<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>) as
determined from JRC's GSW and MODIS mean annual maximum surface water
fraction maps for different thresholds.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Threshold for surface</oasis:entry>
         <oasis:entry colname="col2">Total surface water areas</oasis:entry>
         <oasis:entry colname="col3">Total surface water areas (km<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>) based on</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">water fraction</oasis:entry>
         <oasis:entry colname="col2">(km<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>) based on GSW</oasis:entry>
         <oasis:entry colname="col3">MODIS  surface water fraction</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">90 %</oasis:entry>
         <oasis:entry colname="col2">48 718</oasis:entry>
         <oasis:entry colname="col3">47 145</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">80 %</oasis:entry>
         <oasis:entry colname="col2">55 887</oasis:entry>
         <oasis:entry colname="col3">51 778</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">70 %</oasis:entry>
         <oasis:entry colname="col2">62 371</oasis:entry>
         <oasis:entry colname="col3">58 996</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">60 %</oasis:entry>
         <oasis:entry colname="col2">68 855</oasis:entry>
         <oasis:entry colname="col3">65 993</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">50 %</oasis:entry>
         <oasis:entry colname="col2">75 107</oasis:entry>
         <oasis:entry colname="col3">73 444</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">40 %</oasis:entry>
         <oasis:entry colname="col2">81 220</oasis:entry>
         <oasis:entry colname="col3">82 417</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">30 %</oasis:entry>
         <oasis:entry colname="col2">87 217</oasis:entry>
         <oasis:entry colname="col3">96 239</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">20 %</oasis:entry>
         <oasis:entry colname="col2">93 207</oasis:entry>
         <oasis:entry colname="col3">142 531</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10 %</oasis:entry>
         <oasis:entry colname="col2">99 260</oasis:entry>
         <oasis:entry colname="col3">284 916</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?xmltex \floatpos{p}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e2496">Standard deviation of the surface water fraction as
calculated from <bold>(a)</bold> JRC's GSW and <bold>(b)</bold> MODIS annual maximum surface water
fraction maps for the period from 2000 to 2015.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f05.png"/>

        </fig>

      <p id="d1e2512">Figure 5 shows the standard deviation of the annual maximum surface water
fraction. It indicates that areas of large inter-annual variability agree
between MODIS-based and GSW-based results. Both indicate a larger variability in the surface water fraction in semiarid and desert climate zones, particularly
in the north of Algeria, for the Volga Delta in the Caspian depression, and
along the Tigris and Euphrates rivers of Iraq.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e2517">Seasonality information derived from time series of the <bold>(a)</bold> JRC's GSW and <bold>(b)</bold> MODIS surface water fraction for a single year (October
2014 to September 2015).</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f06.png"/>

        </fig>

      <p id="d1e2532">Figure 6 displays the seasonality metric for the entire study area, with
details for two selected sites shown in panels (a) and (b) of Figs. 7 and 8. Fuente de Piedra is a seasonally flooded lake which usually dries out
completely in summer (May–September) (Batanero et al., 2017; Li et al., 2015) with the exception of extremely wet years
(e.g., 2010, 2011, 2013: Rodriguez-Rodriguez et al., 2016) when water was present throughout the whole year. The differences in
water seasonality for Fuente de Piedra between the two products (Fig. 7a, b)
can be attributed to the fact that GSW lacks observations in<?pagebreak page3047?> wet seasons,
resulting in a reduced water occurrence compared with our MODIS product.
The discontinuities in the Landsat record between seasons can affect the
accuracy of seasonality information, which has also been demonstrated by
Klein et al. (2017) and Pekel et al. (2016). Permanent water is present in parts of Lake Sabkhat al-Jabbul, but
the larger central portion of the lake has highly dynamic intermittent water (Fig. 8). Mixed permanent and semipermanent waters are mostly found on the edge of permanent water and in narrow rivers.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e2537">Seasonality information derived from <bold>(a)</bold> JRC's GSW and <bold>(b)</bold> the MODIS surface water fraction from a single year (October 2014 to
September 2015). The colors in <bold>(a)</bold> and <bold>(b)</bold> are the same as in Fig. 6. <bold>(c)</bold> A scatterplot of the water area obtained from JRC's GSW versus that from MODIS
SWF. <inline-formula><mml:math id="M103" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> represents the Pearson correlation between two datasets. <bold>(d)</bold> A comparison of time series of the surface water area (in km<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>) derived from
JRC's GSW (shown using green asterisks) with MODIS surface water fraction
(shown using blue dots) from 2000 to 2015, along with in situ water level data (shown using orange
dots) for Fuente de Piedra, Spain. <inline-formula><mml:math id="M105" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula> represents the Spearman rank
correlation between the water level and water area.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f07.png"/>

        </fig>

</sec>
<sec id="Ch1.S5.SS3">
  <label>5.3</label><title>MODIS-derived surface water dynamics for selected lakes</title>
      <?pagebreak page3049?><p id="d1e2596">Panels (d) of Figs. 7–8 show the time series of the surface water extent
detected by MODIS and GSW for two selected lakes. Fuente de Piedra (Fig. 7d) experiences large temporal variability in the surface water extent throughout
the year, which is well represented by our MODIS product with 461 time steps
(Table 6). This variability corresponds closely to the in situ water level
data (<inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn></mml:mrow></mml:math></inline-formula>). Note that in extreme wet years (i.e., 2010, 2011, and
2013), the lake remained flooded throughout the year without increasing
in size with regard to water level changes
(Rodriguez-Rodriguez et al., 2016). The water extent derived
from MODIS SWF also matched closely to that from GSW (Fig. 7c, d; <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn></mml:mrow></mml:math></inline-formula>).
GSW only had 73 valid time steps with most observations in dry seasons (i.e.,
June to October); thus, it did not allow for the appropriate capture of the seasonal
dynamics, particularly for the November–March period when the lake usually
reaches its full surface water extent. Time series of the water extent of Lake
Sabkhat al-Jabbul as determined by our MODIS product showed a relative high
correlation with water level data (<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.69</mml:mn></mml:mrow></mml:math></inline-formula>). It also showed good
agreement with the water extent derived from GSW, including the seasonal peak
extent and the minimum surface water extent during the dry season (Fig. 8c, d; <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.88</mml:mn></mml:mrow></mml:math></inline-formula>). This implies that the coarse 500 m MODIS data not only
provide more detailed temporal information (563 MODIS surface water fraction
time steps versus 69 GSW time steps) (Table 6), but they also give accurate estimations
of the surface water area compared with the results from Landsat 30 m
resolution data.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e2649">As in Fig. 7, but for Lake Sabkhat al-Jabbul, Syria. The water level for this lake is
computed from Jason-2/OSTM altimetry and repeats every 10 d.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f08.png"/>

        </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T6"><?xmltex \currentcnt{6}?><label>Table 6</label><caption><p id="d1e2661">Number of valid temporal observations for the three lakes
based on the MODIS surface water fraction and JRC's GSW between February 2000
and October 2015.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Lakes</oasis:entry>
         <oasis:entry colname="col2">MODIS surface</oasis:entry>
         <oasis:entry colname="col3">JRC's</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">water fraction</oasis:entry>
         <oasis:entry colname="col3">GSW</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Fuente de Piedra</oasis:entry>
         <oasis:entry colname="col2">461</oasis:entry>
         <oasis:entry colname="col3">73</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Lake Sabkhat al-Jabbul</oasis:entry>
         <oasis:entry colname="col2">563</oasis:entry>
         <oasis:entry colname="col3">69</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Doñana</oasis:entry>
         <oasis:entry colname="col2">714</oasis:entry>
         <oasis:entry colname="col3">70</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2741">Figure 9 compares the MODIS monthly surface water fraction with the GSW
monthly water history for Doñana, Spain. The visual comparison shows
that the distribution of the MODIS surface water fraction agrees well
with the GSW monthly water maps. The 500 m MODIS surface water fraction is able to capture the spatial patterns as detected from the high-resolution
Landsat-based GSW dataset. Seasonal drying out and flooding of the wetland
is well detected with the<?pagebreak page3050?> MODIS-derived surface water fraction, whereas GSW
lacks temporal details, for example, during large water extents in November
and December. MODIS also captures the timing of the maximum water extent
(i.e., in January) and water retreat (i.e., in July). This example highlights
that the information provided by our MODIS product can contribute to a
better understanding of surface water dynamics.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e2746">Comparison of monthly water distribution based on <bold>(a)</bold> the Landsat-based GSW dataset and <bold>(b)</bold> the MODIS surface water fraction for
Doñana, Spain, for 2011.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://hess.copernicus.org/articles/23/3037/2019/hess-23-3037-2019-f09.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S6">
  <label>6</label><title>Discussion</title>
      <?pagebreak page3051?><p id="d1e2770">We estimated the surface water fraction for the Mediterranean region from MODIS data, and improved on previous efforts to estimate surface water fraction
from medium-resolution imagery (MODIS or similar). The prediction accuracy
of our model (<inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.91</mml:mn></mml:mrow></mml:math></inline-formula>, RMSE <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">11.41</mml:mn></mml:mrow></mml:math></inline-formula> %, and MAE <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6.39</mml:mn></mml:mrow></mml:math></inline-formula> %) is
higher than the <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.625 reported by Weiss and
Crabtree (2011), who used a linear regression model, and the <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.7
reported by Guerschmann et al. (2011), using a logistic
regression model. This research successfully expanded our previous work
(Li et al., 2018) by upscaling it from a relatively
small region to the whole Mediterranean while retaining a similar high
accuracy (both achieved an <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.91). This attributes to the
feasibility and robustness of Cubist regression modeling with respect to dealing with different
environmental conditions when training data are collected across a wide
geography resulting in varying spectral characteristics.</p>
      <p id="d1e2842">Secondly, we generated surface water fraction maps at high temporal
frequency, which is an advantage over existing fine-resolution datasets. Our
MODIS-derived surface water fraction product accurately displays the
spatiotemporal variability of surface water. The comparison with the GSW 30 m product and water level data (Figs. 7–9) reveal that our product can
efficiently monitor the seasonal, intra-annual, and long-term surface water
dynamics with good spatial and temporal accuracy. For example, it
complements the GSW by allowing for the detection of inundation and
recession processes over short time periods and for the better
representation of seasonality changes and temporal trends over longer
periods. The MODIS surface water fraction can also accurately detect the spatial distribution of surface water inclusive of small water bodies (less than one
MODIS pixel) and narrow rivers, which are missing in other coarse-resolution
products using binary classification method such as MOD44W  (Salomon et al., 2004). Metrics derived from the MODIS surface water fraction
and GSW time series can reflect different facets of surface water dynamics. The accuracy of some metrics, such as seasonality, relies on the number of valid
observations and the temporal interval. Landsat-derived metrics might be
problematic in areas with large temporal gaps caused by persistent cloud
cover, as shown in this study (Fig. 8) and previously by
Pekel et al. (2016) and Klein et al. (2017). Although cloud coverage also limits MODIS observations, the
probability of obtaining cloud-free observations is higher (Table 6) due to
the daily acquisitions and consequent temporal compositing possibilities.
With these advantages, we expect that our MODIS surface water fraction
product could fill in important information on surface water for areas and
time periods for which cloud-free Landsat acquisitions are few or
non-existent.</p>
      <p id="d1e2845">Our MODIS-derived surface water fraction product also has limitations. Firstly, it is designed to detect only open surface water; therefore, it may not
effectively capture water<?pagebreak page3052?> bodies covered by dense vegetation, such as
swamps, lakes with considerable coverage of aquatic vegetation, and
inundated dense forests. Secondly, the MODIS surface water fraction product
overestimates small surface water fractions of less than 20 % (Table 5),
which has also been found in previous studies on surface water fraction mapping
(Li et al., 2018; Parrens et al., 2017). This overestimation might be
attributed to the mixed spectral response of pixels with different land
cover types, as already demonstrated by many studies  (e.g., Guerschmann et al., 2011; Klein et al., 2017). Further work could consider reassigning
pixels with less than 20 % surface water to 0 % water fraction for
locations where water is never present according to the GSW maximum water
extent. Thirdly, the auxiliary layers utilized for the identification of
potential areas of commission errors also appear to have some limitations.
For example, some urban areas might be not mapped in MCD12Q1, and areas of
cloud cover and cloud shadow might not be completely removed from the
MCD43A4 product. The importance of these limitations may diminish as the
quality of these auxiliary layers improves or dynamic datasets rather than
static layers are incorporated (e.g., Global Human Settlement Layer:
Pesaresi et al., 2016). Fourthly, the MCD43A4 product also suffers from many
missing values, especially in regions with large amounts of precipitation,
aerosol concentrations, or snow and ice coverage (Klein et al., 2017). Future research should focus on combining other moderate-resolution data (e.g., MOD09) for areas with missing data to ensure a
gap-free reconstruction of inland water development for the past and future.</p>
      <p id="d1e2848">This work can be further scaled up over much larger regions and for shorter
(e.g., daily) time intervals. A high-quality training dataset is crucial for
the effective application of the rule-base regression model and the collection of such training data is time consuming (Sun et al., 2012). In this paper,
time series of the GSW monthly water history dataset proved to be an efficient
basis for building a reliable training dataset. Considering that GSW is
globally available, we are confident that our approach can be scaled to
monitor the surface water fraction globally with MODIS data. Although the
surface water fraction maps were produced with an 8 d time step, the model
developed in this paper was actually trained using daily MODIS data and
could be directly applied to that temporal resolution. The resulting daily
surface water fraction maps could be of high interest for ecological and
hydrological research. The recent GCOS
report requires water extent and lake ice cover with a daily temporal resolution and a 20 m and 300 m spatial resolution, respectively (Belward, 2016). Our approach makes this
requirement for the coarser of the two resolutions within reach.</p>
      <p id="d1e2852">Our MODIS surface water fraction dataset may benefit a large number of
applications. For example, it could be used as a monitoring tool for
analyzing hydrologic extremes such as floods and droughts, detecting
abnormal changes of wetland hydrology, capturing short-duration events,
identifying newly formed and disappearing water bodies, and estimating
global water loss. The MODIS surface water fraction dataset may help to
improve the calibration and validation of hydrological models. For example,
the water area can help to estimate a series of hydrological parameters such
as water discharge (Huang et al., 2018) and water volume
(Busker et al., 2019; Cael et al., 2017; Duan and Bastiaanssen, 2013; Tong
et al., 2016). This would be particularly useful for areas where in situ  measurements are sparse or inaccessible. Closely monitoring hydrological variability is important for understanding how climate change, meteorological variability,
and human activities affect the dynamics of surface water and human
livelihoods  (Tulbure and Broich, 2019; Zhang et al., 2019). It may also
provide new insights for understanding how surface water dynamics further
influence climate. For example, lake expansion and the creation of new dams can alter local and regional precipitation patterns  (Ekhtiari et al., 2017;
Hossain et al., 2009; Mohamed Degu et al., 2011). Similarly, our long-term
records and derived metrics have the potential to contribute to the management and conservation of biodiversity and other ecosystem services associated with terrestrial surface water and wetlands.</p>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <label>7</label><title>Conclusion</title>
      <p id="d1e2863">We derived an 8 d, 500 m resolution surface water fraction product over the
Mediterranean for the period from 2000 to 2017 by applying a global Cubist regression tree
model to MODIS and SRTM data. We validated the results with JRC's
Landsat-derived GSW dataset, which resulted in a high overall accuracy
(<inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.91</mml:mn></mml:mrow></mml:math></inline-formula>, RMSE <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">11.41</mml:mn></mml:mrow></mml:math></inline-formula> %, and MAE <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6.39</mml:mn></mml:mrow></mml:math></inline-formula> %). The MODIS-derived surface water fraction showed a good spatial and temporal correspondence
with JRC's GSW. Comparison with satellite altimetry and in situ water level
data for selected lakes demonstrated the ability of MODIS surface water
fraction to effectively monitor seasonal and inter-annual changes in surface
water extent. Our dataset provides a consistent, long-term record (18 years) of 8 d water fraction dynamics for the Mediterranean region, and
complements fine spatial resolution surface water products, especially in
regions where such products have long temporal and spatial data gaps due to
both the limited number of acquisitions and persistent cloud cover. Our
approach is also promising for monitoring surface water fraction at the global scale and at a daily interval.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e2905">The final derived 18 years of surface water
fraction maps for the Mediterranean region are available from
<ext-link xlink:href="https://doi.org/10.17026/dans-xrz-y92s" ext-link-type="DOI">10.17026/dans-xrz-y92s</ext-link> (Li, 2019). The GEE and R code used for this
paper are available upon request from the first author.</p>
  </notes><?xmltex \hack{\newpage}?><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e2915">LL and VA designed the experiment.
LL performed all analysis and developed the 18-year database. LL prepared
the paper with contributions from all co-authors. All authors
approved the final version of the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e2921">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="sistatement"><title>Special issue statement</title>

      <p id="d1e2927">This article is part of the special issue “Hydrological cycle in the Mediterranean (ACP/AMT/GMD/HESS/NHESS/OS inter-journal SI)”. It is not associated with a conference.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e2934">We would like to thank Alan Belward and Jean-François Pekel (Joint Research Centre) for their support in accessing the global surface water datasets. Many
thanks to the authorities of the Fuente de Piedra Natural Reserve and the
Junta de Andalucía for providing the in situ water level data used in
this study. We also thank Willem Nieuwenhuis for his technical support.</p></ack><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e2939">This paper was edited by Eric Martin and reviewed by two anonymous referees.</p>
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    <!--<article-title-html>A new dense 18-year time series of surface water fraction estimates from MODIS for the Mediterranean region</article-title-html>
<abstract-html><p>Detailed knowledge on surface water distribution and its
changes is of high importance for water management and biodiversity
conservation. Landsat-based assessments of surface water, such as the Global
Surface Water (GSW) dataset developed by the European Commission Joint
Research Centre (JRC), may not capture important changes in surface water
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Resolution Imaging Spectrometer (MODIS) sensors can compensate for this
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cell, we developed a global rule-based regression model for estimating the
surface water fraction from a 500&thinsp;m nadir reflectance product from MODIS
(MCD43A4). The model was trained and evaluated with the GSW monthly water
history dataset. A high estimation accuracy (<i>R</i><sup>2</sup> = 0.91, RMSE&thinsp; = 11.41&thinsp;%, and MAE&thinsp; = 6.39&thinsp;%) was achieved. We then applied the algorithm to
18 years of MODIS data (2000–2017) to generate a time series of surface
water fraction maps at an 8&thinsp;d interval for the Mediterranean. From these maps
we derived metrics including the mean annual maximum, the standard deviation, and the seasonality of surface water. The dynamic surface water extent estimates
from MODIS were compared with the results from GSW and water level data
measured in situ or by satellite altimetry, yielding similar temporal
patterns. Our dataset complements surface water products at a fine spatial
resolution by adding more temporal detail, which permits the effective
monitoring and assessment of the seasonal, inter-annual, and long-term
variability of water resources, inclusive of small water bodies.</p></abstract-html>
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